RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 GSPT2Q8IYD1 628 aaKnown RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 STK40Q8N2I9 435 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 IL17RCQ8NAC3 791 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 TXNDC5Q8NBS9 432 aaKnown RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 RPLP0P6Q8NHW5 317 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 MRGPRX2Q96LB1 330 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 NSMCE3Q96MG7 304 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 TBL1YQ9BQ87 522 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 HEPHQ9BQS7 1158 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 KANSL1LA0AUZ9 987 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 SMAPO00193 183 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 TP73O15350 636 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 AGTP01019 485 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 SERPINA4P29622 427 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 GRIA1P42261 906 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 STARD6P59095 220 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 CDK16Q00536 496 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 ARSIQ5FYB1 569 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 CFAP58Q5T655 872 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 C9orf64Q5T6V5 341 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 DNAAF3Q8N9W5 541 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 OR8D1Q8WZ84 308 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 TADA1Q96BN2 335 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 NEUROG2Q9H2A3 272 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 PIH1D1Q9NWS0 290 aaKnown RBP17.65■□□□□ 0.42
PHGDH-230ENST00000641927 MTRF1LQ9UGC7 380 aaKnown RBP17.65■□□□□ 0.42
PHGDH-230ENST00000641927 IL36AQ9UHA7 158 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 CHKBQ9Y259 395 aa17.65■□□□□ 0.42
PHGDH-230ENST00000641927 UGT2B4P06133 528 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 TARSP26639 723 aaKnown RBP17.64■□□□□ 0.42
PHGDH-230ENST00000641927 CDK18Q07002 472 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 TRAF2Q12933 501 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 LRRC32Q14392 662 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 ELAVL3Q14576 367 aaKnown RBP17.64■□□□□ 0.42
PHGDH-230ENST00000641927 GRM3Q14832 879 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 STARD3Q14849 445 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 LINC00523Q86TU6 105 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 SLC25A41Q8N5S1 370 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 OR52K1Q8NGK4 314 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 PWWP2AQ96N64 755 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 TUBGCP5Q96RT8 1024 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 TDRD1Q9BXT4 1180 aaKnown RBP17.64■□□□□ 0.42
PHGDH-230ENST00000641927 FOXQ1Q9C009 403 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 LMAN1LQ9HAT1 526 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 LTB4R2Q9NPC1 389 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 PRSS16Q9NQE7 514 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 ZDHHC18Q9NUE0 388 aa17.64■□□□□ 0.42
PHGDH-230ENST00000641927 MTF2Q9Y483 593 aaPredicted RBP17.64■□□□□ 0.42
PHGDH-230ENST00000641927 ATG2BQ96BY7 2078 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 FAM170BA6NMN3 283 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 LEFTY1O75610 366 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 SUN1O94901 812 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 HOXB2P14652 356 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 ENPP2Q13822 863 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 GALNT3Q14435 633 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 SLC14A2Q15849 920 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 WDR93Q6P2C0 686 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 GDPD4Q6W3E5 623 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 CCDC25Q86WR0 208 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 KLHDC8BQ8IXV7 354 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 RMDN1Q96DB5 314 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 FEM1CQ96JP0 617 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 FMO2Q99518 471 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 CPEB1Q9BZB8 566 aaKnown RBP17.64■□□□□ 0.41
PHGDH-230ENST00000641927 FAM129AQ9BZQ8 928 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 TBC1D17Q9HA65 648 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 PCDHB9Q9Y5E1 797 aa17.64■□□□□ 0.41
PHGDH-230ENST00000641927 UQCRHLA0A096LP55 91 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 SOCS5O75159 536 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 AVILO75366 819 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 IL1BP01584 269 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 TUBBP07437 444 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 UQCRHP07919 91 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 MYBL2P10244 700 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 CHRNB1P11230 501 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 TNFRSF8P28908 595 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 ECHS1P30084 290 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 CHRNA4P43681 627 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 EPHB1P54762 984 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 ZXDAP98168 799 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 HIF1AQ16665 826 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 POM121L1PQ3SYA9 428 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 ARMC12Q5T9G4 340 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 CCNI2Q6ZMN8 369 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-230ENST00000641927 Q6ZS52 159 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 DSG4Q86SJ6 1040 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 ZCCHC9Q8N567 271 aaKnown RBP17.63■□□□□ 0.41
PHGDH-230ENST00000641927 MCUQ8NE86 351 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 LPCAT1Q8NF37 534 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 SERPINB12Q96P63 405 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 UHRF1Q96T88 793 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-230ENST00000641927 NELL2Q99435 816 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 ADGRE3Q9BY15 652 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 SUV39H2Q9H5I1 410 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 ARIH1Q9Y4X5 557 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-230ENST00000641927 WASF2Q9Y6W5 498 aa17.63■□□□□ 0.41
PHGDH-230ENST00000641927 KPNA3O00505 521 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-230ENST00000641927 ADAM23O75077 832 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 PRNPP04156 253 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 CTSLP07711 333 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms