RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 NPC1L1Q9UHC9 1359 aa5.54□□□□□ -1.52
CASC19-261ENST00000641853 RGPD3A6NKT7 1758 aaPredicted RBP5.53□□□□□ -1.52
CASC19-261ENST00000641853 RGPD4Q7Z3J3 1758 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 TTC3P53804 2025 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 NCAPD2Q15021 1401 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 MYMKA6NI61 221 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 CCNT1O60563 726 aaKnown RBP5.53□□□□□ -1.52
CASC19-261ENST00000641853 CD72P21854 359 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 PRKCHP24723 683 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 PTPN9P43378 593 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 TNNT2P45379 298 aaPredicted RBP5.53□□□□□ -1.52
CASC19-261ENST00000641853 TMPRSS3P57727 454 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 IL13RA2Q14627 380 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 Q5PR19 223 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 TBC1D9BQ66K14 1250 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 NAPEPLDQ6IQ20 393 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 TMEM71Q6P5X7 295 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 IGFN1Q86VF2 1251 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 FAM217AQ8IXS0 508 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 ENGASEQ8NFI3 743 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 HDAC7Q8WUI4 952 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 FAR1Q8WVX9 515 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 TWNKQ96RR1 684 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 WDR77Q9BQA1 342 aaPredicted RBP5.53□□□□□ -1.52
CASC19-261ENST00000641853 B3GNT4Q9C0J1 378 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 MEGF6O75095 1541 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 PCDH11XQ9BZA7 1347 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 PCDH11YQ9BZA8 1340 aa5.53□□□□□ -1.52
CASC19-261ENST00000641853 FAM90A10PA6NDY2 464 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 TPD52L2O43399 206 aaKnown RBP5.52□□□□□ -1.53
CASC19-261ENST00000641853 TMCC1O94876 653 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 KLKB1P03952 638 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 CKMT1AP12532 417 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 UNGP13051 313 aaPredicted RBP5.52□□□□□ -1.53
CASC19-261ENST00000641853 CPA1P15085 419 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 TBXAS1P24557 533 aaPredicted RBP5.52□□□□□ -1.53
CASC19-261ENST00000641853 HMGB2P26583 209 aaKnown RBP5.52□□□□□ -1.53
CASC19-261ENST00000641853 GJC1P36383 396 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 POLGP54098 1239 aaPredicted RBP5.52□□□□□ -1.53
CASC19-261ENST00000641853 EFR3AQ14156 821 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 WASHC2DQ5SRD0 308 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 AADACL2Q6P093 401 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 PARM1Q6UWI2 310 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 SLC16A12Q6ZSM3 486 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 CTU1Q7Z7A3 348 aaKnown RBP5.52□□□□□ -1.53
CASC19-261ENST00000641853 SETD9Q8NE22 299 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 PYM1Q9BRP8 204 aaKnown RBP5.52□□□□□ -1.53
CASC19-261ENST00000641853 POLDIP3Q9BY77 421 aaKnown RBP5.52□□□□□ -1.53
CASC19-261ENST00000641853 NLKQ9UBE8 527 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 DGKBQ9Y6T7 804 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 NHSQ6T4R5 1651 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 VWA3AA6NCI4 1184 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 SAC3D1A6NKF1 404 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 SCP2P22307 547 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 PAPOLAP51003 745 aaKnown RBP5.52□□□□□ -1.53
CASC19-261ENST00000641853 EIF4A2Q14240 407 aaKnown RBP5.52□□□□□ -1.53
CASC19-261ENST00000641853 FBXO43Q4G163 708 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 DENND1BQ6P3S1 775 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 C9orf47Q6ZRZ4 202 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 WDR5BQ86VZ2 330 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 CPOQ8IVL8 374 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 NSMCE1Q8WV22 266 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 LPAR1Q92633 364 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 IFT27Q9BW83 186 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 ISCUQ9H1K1 167 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 CXorf56Q9H5V9 222 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 CDH22Q9UJ99 828 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 RAP2CQ9Y3L5 183 aa5.52□□□□□ -1.53
CASC19-261ENST00000641853 RREB1Q92766 1687 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 IGSF1Q8N6C5 1336 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 SBF2Q86WG5 1849 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 TMEM247A6NEH6 219 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 DDTLA6NHG4 134 aaPredicted RBP5.51□□□□□ -1.53
CASC19-261ENST00000641853 HNF1BP35680 557 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 RFX5P48382 616 aaPredicted RBP5.51□□□□□ -1.53
CASC19-261ENST00000641853 FOXG1P55316 489 aaPredicted RBP5.51□□□□□ -1.53
CASC19-261ENST00000641853 SELENOVP59797 346 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 ZNF549Q6P9A3 640 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 DPP10Q8N608 796 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 ANKRD44Q8N8A2 993 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 C7orf57Q8NEG2 295 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 URB1-AS1Q96HZ7 61 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 CLSTN3Q9BQT9 956 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 WACQ9BTA9 647 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 EBF3Q9H4W6 596 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 LUZP4Q9P127 313 aa5.51□□□□□ -1.53
CASC19-261ENST00000641853 MAP2P11137 1827 aaKnown RBP5.5□□□□□ -1.53
CASC19-261ENST00000641853 GAGE12JA6NER3 117 aa5.5□□□□□ -1.53
CASC19-261ENST00000641853 STMND1H3BQB6 276 aa5.5□□□□□ -1.53
CASC19-261ENST00000641853 I6L893 689 aaPredicted RBP5.5□□□□□ -1.53
CASC19-261ENST00000641853 EIF3FO00303 357 aaPredicted RBP5.5□□□□□ -1.53
CASC19-261ENST00000641853 TNFRSF13BO14836 293 aaPredicted RBP5.5□□□□□ -1.53
CASC19-261ENST00000641853 ARRB2P32121 409 aa5.5□□□□□ -1.53
CASC19-261ENST00000641853 TRAF1Q13077 416 aa5.5□□□□□ -1.53
CASC19-261ENST00000641853 SLC12A1Q13621 1099 aa5.5□□□□□ -1.53
CASC19-261ENST00000641853 RPE65Q16518 533 aa5.5□□□□□ -1.53
CASC19-261ENST00000641853 TMEM268Q5VZI3 342 aa5.5□□□□□ -1.53
CASC19-261ENST00000641853 GJB7Q6PEY0 223 aa5.5□□□□□ -1.53
CASC19-261ENST00000641853 FAM185AQ8N0U4 392 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms