RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CSKP41240 450 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 GRIA4P48058 902 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 SCNN1BP51168 640 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 SGSHP51688 502 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 NEK3P51956 506 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 MAXP61244 160 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 SNRPD1P62314 119 aaKnown RBP9.81□□□□□ -0.84
PHGDH-215ENST00000641371 PRAMEP78395 509 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 CRADDP78560 199 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 ARF5P84085 180 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 ACVR1Q04771 509 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 RAD51Q06609 339 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 DMTNQ08495 405 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 SEPT6Q14141 434 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 CYTH1Q15438 398 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 SHHQ15465 462 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 PCSK7Q16549 785 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 ZSCAN26Q16670 478 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 PLEKHG6Q3KR16 790 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 CCDC153Q494R4 210 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 TAF1BQ53T94 588 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-215ENST00000641371 SIRPB2Q5JXA9 342 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 PPP2R2DQ66LE6 453 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 MRNIPQ6NTE8 343 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 STRA8Q7Z7C7 330 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 C4orf33Q8N1A6 199 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 PGBD5Q8N414 524 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 EFHBQ8N7U6 833 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.81□□□□□ -0.84
PHGDH-215ENST00000641371 MDM1Q8TC05 714 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 LRRC8CQ8TDW0 803 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 PTPRN2Q92932 1015 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 IRF7Q92985 503 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 MFSD3Q96ES6 412 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 ALG14Q96F25 216 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 TSPAN17Q96FV3 270 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 FCRL3Q96P31 734 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-215ENST00000641371 ZNF317Q96PQ6 595 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-215ENST00000641371 TUBGCP5Q96RT8 1024 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 APOL2Q9BQE5 337 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 TDRD1Q9BXT4 1180 aaKnown RBP9.81□□□□□ -0.84
PHGDH-215ENST00000641371 MFSD1Q9H3U5 465 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 SLC28A3Q9HAS3 691 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 CHRAC1Q9NRG0 131 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 SMYD2Q9NRG4 433 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 GDE1Q9NZC3 331 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.81□□□□□ -0.84
PHGDH-215ENST00000641371 VPS51Q9UID3 782 aa9.81□□□□□ -0.84
PHGDH-215ENST00000641371 ATXN2Q99700 1313 aaKnown RBP9.81□□□□□ -0.84
PHGDH-215ENST00000641371 A0A1W2PPM1 405 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 KLF11O14901 512 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 BIRC5O15392 142 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 MOSPD3O75425 235 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 RFPL1O75677 317 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 ADH1CP00326 375 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 GSRP00390 522 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 IL1BP01584 269 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 ASLP04424 464 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 VIMP08670 466 aaKnown RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 ERVK-10P10266 1014 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 PYGBP11216 843 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 OGNP20774 298 aaKnown RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 NMBRP28336 390 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 CRABP2P29373 138 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 TYK2P29597 1187 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 RPA3P35244 121 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 PPARGP37231 505 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 NNMTP40261 264 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 CCR2P41597 374 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 MAGEA12P43365 314 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 CD151P48509 253 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 CLCN5P51795 746 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 PRKAA2P54646 552 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 ZXDBP98169 803 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 TAF1AQ15573 450 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 PREPLQ4J6C6 727 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 HSP90AA5PQ58FG0 334 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 AARS2Q5JTZ9 985 aaKnown RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 C9orf50Q5SZB4 431 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 ARMC12Q5T9G4 340 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 MROH9Q5TGP6 573 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 ATG16L1Q676U5 607 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 NEPROQ6NW34 567 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 NCEH1Q6PIU2 408 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 LVRNQ6Q4G3 990 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 TMEM184AQ6ZMB5 413 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 SH2D5Q6ZV89 423 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 GRASPQ7Z6J2 395 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 SDCCAG8Q86SQ7 713 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 SRLQ86TD4 932 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 CACNA2D3Q8IZS8 1091 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 AHI1Q8N157 1196 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 PCDH20Q8N6Y1 951 aaKnown RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 C2CD4AQ8NCU7 369 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 VN1R2Q8NFZ6 395 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 GPR150Q8NGU9 434 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 TCP10LQ8TDR4 215 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 ZNF473Q8WTR7 871 aaKnown RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 WBP2Q969T9 261 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 ZNF707Q96C28 371 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms