RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 FRS2Q8WU20 508 aa20.03■□□□□ 0.8
PHGDH-210ENST00000641115 C9orf72Q96LT7 481 aa20.03■□□□□ 0.8
PHGDH-210ENST00000641115 TTC25Q96NG3 672 aa20.03■□□□□ 0.8
PHGDH-210ENST00000641115 TUBGCP5Q96RT8 1024 aa20.03■□□□□ 0.8
PHGDH-210ENST00000641115 ATP13A3Q9H7F0 1226 aa20.03■□□□□ 0.8
PHGDH-210ENST00000641115 SLC2A4RGQ9NR83 387 aa20.03■□□□□ 0.8
PHGDH-210ENST00000641115 PCDHGC4Q9Y5F7 938 aa20.03■□□□□ 0.8
PHGDH-210ENST00000641115 RAI2Q9Y5P3 530 aa20.03■□□□□ 0.8
PHGDH-210ENST00000641115 SDR42E2A6NKP2 422 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 ALOX15BO15296 676 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 POP4O95707 220 aaKnown RBP20.02■□□□□ 0.8
PHGDH-210ENST00000641115 GLULP15104 373 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 MGAT1P26572 445 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 SERPINA4P29622 427 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 ELK3P41970 407 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 TNFRSF4P43489 277 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 NPY2RP49146 381 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 GRM3Q14832 879 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 MYLK3Q32MK0 819 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 SPDYCQ5MJ68 293 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 CASC4Q6P4E1 433 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 TXNDC11Q6PKC3 985 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 SERPINA13PQ6UXR4 307 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 DPY19L3Q6ZPD9 716 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 SLC25A41Q8N5S1 370 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 PAF1Q8N7H5 531 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 FBXO36Q8NEA4 188 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 PDCD6IPQ8WUM4 868 aaKnown RBP20.02■□□□□ 0.8
PHGDH-210ENST00000641115 ADGRE3Q9BY15 652 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 SEMA4AQ9H3S1 761 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 ARNT2Q9HBZ2 717 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 FBRSL1Q9HCM7 1045 aaKnown RBP20.02■□□□□ 0.8
PHGDH-210ENST00000641115 SAMD15Q9P1V8 674 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 CHMP2BQ9UQN3 213 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 MAD1L1Q9Y6D9 718 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 TEX264Q9Y6I9 313 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 PRUNE2Q8WUY3 3088 aa20.02■□□□□ 0.8
PHGDH-210ENST00000641115 SOCS5O75159 536 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 NDST3O95803 873 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 FGF1P05230 155 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 CHRNA4P43681 627 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 ZP2Q05996 745 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 TRAF2Q12933 501 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 HDXQ7Z353 690 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 OR2A12Q8NGT7 310 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 NSMCE3Q96MG7 304 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 IL22Q9GZX6 179 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 PABPC3Q9H361 631 aaKnown RBP20.02■□□□□ 0.79
PHGDH-210ENST00000641115 ZDHHC6Q9H6R6 413 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 THAP10Q9P2Z0 257 aaPredicted RBP20.02■□□□□ 0.79
PHGDH-210ENST00000641115 CHKBQ9Y259 395 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 STARD13Q9Y3M8 1113 aa20.02■□□□□ 0.79
PHGDH-210ENST00000641115 MYLKQ15746 1914 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 EDDM13A0A1B0GTR0 161 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 HSD17B3P37058 310 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 GRSF1Q12849 480 aaKnown RBP eCLIP20.01■□□□□ 0.79
PHGDH-210ENST00000641115 CASP8Q14790 479 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 PON2Q15165 354 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 SIRPB2Q5JXA9 342 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 DENND5AQ6IQ26 1287 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 STAMBPL1Q96FJ0 436 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 SIGLEC10Q96LC7 697 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 TRIB3Q96RU7 358 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 NAT9Q9BTE0 207 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 CPEB1Q9BZB8 566 aaKnown RBP20.01■□□□□ 0.79
PHGDH-210ENST00000641115 TMEM245Q9H330 911 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 SYBUQ9NX95 663 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 NINJ2Q9NZG7 142 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 DUSP12Q9UNI6 340 aa20.01■□□□□ 0.79
PHGDH-210ENST00000641115 WASH3PC4AMC7 463 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 NPC1O15118 1278 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 PIGNO95427 931 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 TTC4O95801 387 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 ATXN1LP0C7T5 689 aaKnown RBP20■□□□□ 0.79
PHGDH-210ENST00000641115 TPH1P17752 444 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 DRD1P21728 446 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 GALNT3Q14435 633 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 KYNUQ16719 465 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 HNRNPA1L2Q32P51 320 aaKnown RBP20■□□□□ 0.79
PHGDH-210ENST00000641115 ARMC12Q5T9G4 340 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 EGFLAMQ63HQ2 1017 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 CAMK1DQ8IU85 385 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 CCNJLQ8IV13 435 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 PALM2Q8IXS6 379 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 AGGF1Q8N302 714 aaeCLIP20■□□□□ 0.79
PHGDH-210ENST00000641115 MPP5Q8N3R9 675 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 ZNF366Q8N895 744 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 ZNF513Q8N8E2 541 aaPredicted RBP20■□□□□ 0.79
PHGDH-210ENST00000641115 PTPRN2Q92932 1015 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 RMDN1Q96DB5 314 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 EBNA1BP2Q99848 306 aaKnown RBP20■□□□□ 0.79
PHGDH-210ENST00000641115 HEPHQ9BQS7 1158 aa20■□□□□ 0.79
PHGDH-210ENST00000641115 ZC3H7BQ9UGR2 993 aaKnown RBP20■□□□□ 0.79
PHGDH-210ENST00000641115 DYNC1LI1Q9Y6G9 523 aaKnown RBP20■□□□□ 0.79
PHGDH-210ENST00000641115 K7EQS6 105 aa19.99■□□□□ 0.79
PHGDH-210ENST00000641115 RIPK2O43353 540 aa19.99■□□□□ 0.79
PHGDH-210ENST00000641115 ACSL3O95573 720 aa19.99■□□□□ 0.79
PHGDH-210ENST00000641115 HNRNPLP14866 589 aaKnown RBP eCLIP19.99■□□□□ 0.79
PHGDH-210ENST00000641115 GKP32189 559 aa19.99■□□□□ 0.79
PHGDH-210ENST00000641115 CRADDP78560 199 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms