RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 GOLGA8RI6L899 631 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 LINC01565O15544 149 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 SMAD6O43541 496 aaKnown RBP18.41■□□□□ 0.54
PHGDH-209ENST00000641074 KRT38O76015 456 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 FGF1P05230 155 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 TYRP14679 529 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 BMP8BP34820 402 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 VIPR2P41587 438 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 SERPINB9P50453 376 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 RHOAP61586 193 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 HYAL1Q12794 435 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 PITRM1Q5JRX3 1037 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 ARMC3Q5W041 872 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 MGARPQ8TDB4 240 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 ATXN2LQ8WWM7 1075 aaKnown RBP18.41■□□□□ 0.54
PHGDH-209ENST00000641074 ATP2A3Q93084 1043 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 CENPTQ96BT3 561 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 TREX1Q9NSU2 369 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 CHKBQ9Y259 395 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 MYO9BQ13459 2157 aa18.41■□□□□ 0.54
PHGDH-209ENST00000641074 NUP210Q8TEM1 1887 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 FAM47DPA6NHR8 397 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 GOLGA8TH3BQL2 631 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 SLC9A3R1O14745 358 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 PRPF4O43172 522 aaKnown RBP eCLIP18.4■□□□□ 0.543e-6■■■■□ 19.9
PHGDH-209ENST00000641074 TYROBPO43914 113 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 NDST3O95803 873 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 CNGA3Q16281 694 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 TCEAL5Q5H9L2 206 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 FAM78AQ5JUQ0 283 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 MROH9Q5TGP6 573 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 NCEH1Q6PIU2 408 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 TMEM184AQ6ZMB5 413 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 SH2D5Q6ZV89 423 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 GPR149Q86SP6 731 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 FGF13Q92913 245 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 MTBPQ96DY7 904 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 TDRD1Q9BXT4 1180 aaKnown RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 SSU72Q9NP77 194 aaKnown RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 SMG5Q9UPR3 1016 aaKnown RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 PCDHGC4Q9Y5F7 938 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 VAPBO95292 243 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 ARNTP27540 789 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 GBP2P32456 591 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 CTSOP43234 321 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 ARCN1P48444 511 aaKnown RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 LRRC14Q15048 493 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 FUT11Q495W5 492 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 ATXN7L2Q5T6C5 722 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 PDPK2PQ6A1A2 396 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 ASB16Q96NS5 453 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 CPNE1Q99829 537 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 NSUN3Q9H649 340 aaKnown RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 MLXIPLQ9NP71 852 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 IARS2Q9NSE4 1012 aaKnown RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 MARK1Q9P0L2 795 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 ARIH1Q9Y4X5 557 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-209ENST00000641074 RAI2Q9Y5P3 530 aa18.4■□□□□ 0.54
PHGDH-209ENST00000641074 REV3LO60673 3130 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 MROH6A6NGR9 719 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 PRLP01236 227 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 PYGBP11216 843 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 CNTFP26441 200 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 RPA3P35244 121 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-209ENST00000641074 GP5P40197 560 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 SLC18A1P54219 525 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 TSTD2Q5T7W7 516 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 SYCE2Q6PIF2 218 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 GET4Q7L5D6 327 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-209ENST00000641074 EFHBQ8N7U6 833 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 BANPQ8N9N5 519 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 TM6SF2Q9BZW4 377 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 DUS2Q9NX74 493 aaKnown RBP18.39■□□□□ 0.53
PHGDH-209ENST00000641074 NKIRAS1Q9NYS0 192 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 TXNDC16Q9P2K2 825 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 GGA2Q9UJY4 613 aa18.39■□□□□ 0.53
PHGDH-209ENST00000641074 RFPL1O75677 317 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 PRKCGP05129 697 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 PDHA1P08559 390 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 F7P08709 466 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-209ENST00000641074 ALADP13716 330 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 CA4P22748 312 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 SLC18A2Q05940 514 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 SLC20A2Q08357 652 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 TRAF2Q12933 501 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 GRTP1Q5TC63 336 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 KIAA0930Q6ICG6 404 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-209ENST00000641074 ANKRD54Q6NXT1 300 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 STRA8Q7Z7C7 330 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 SRLQ86TD4 932 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 BLOC1S5Q8TDH9 187 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 DENND1AQ8TEH3 1009 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 OSCP1Q8WVF1 389 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 SMARCD2Q92925 531 aa18.38■□□□□ 0.53
PHGDH-209ENST00000641074 ALKBH8Q96BT7 664 aaKnown RBP18.38■□□□□ 0.53
PHGDH-209ENST00000641074 RPL10LQ96L21 214 aaKnown RBP18.38■□□□□ 0.53
PHGDH-209ENST00000641074 LDB2O43679 373 aa18.37■□□□□ 0.53
PHGDH-209ENST00000641074 ZNF821O75541 412 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-209ENST00000641074 PAPSS2O95340 614 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-209ENST00000641074 PIRTP0C851 137 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms