RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CKMT2P17540 419 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 ARNTP27540 789 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 DYNC1I2Q13409 638 aaKnown RBP14.73□□□□□ -0.05
SCARB2-221ENST00000640341 MTX3Q5HYI7 312 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 PIM3Q86V86 326 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 IFNEQ86WN2 208 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 TRIML2Q8N7C3 387 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 SHCBP1Q8NEM2 672 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 ISL2Q96A47 359 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 NTAN1Q96AB6 310 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 KIFC1Q9BW19 673 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 OSBPL2Q9H1P3 480 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 GLOD4Q9HC38 313 aa14.73□□□□□ -0.05
SCARB2-221ENST00000640341 PAGE1O75459 146 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 RANBP1P43487 201 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 COG7P83436 770 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 PTPRCAPQ14761 206 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 TIGD5Q53EQ6 642 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 KRT80Q6KB66 452 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 METTL25Q8N6Q8 603 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 GRIN3AQ8TCU5 1115 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 LPGAT1Q92604 370 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 SMARCD1Q96GM5 515 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 SLC9A7Q96T83 725 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 OLFM1Q99784 485 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 NOL11Q9H8H0 719 aaKnown RBP14.72□□□□□ -0.05
SCARB2-221ENST00000640341 LIN28AQ9H9Z2 209 aaKnown RBP14.72□□□□□ -0.05
SCARB2-221ENST00000640341 BCAP29Q9UHQ4 241 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 RIMS3Q9UJD0 308 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 ANKRD6Q9Y2G4 727 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 WDR90Q96KV7 1748 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 ZNF839A8K0R7 811 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 PSMD12O00232 456 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-221ENST00000640341 AKAP10O43572 662 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 F9P00740 461 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 CASP2P42575 452 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 MYBPC1Q00872 1141 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 BTBD8Q5XKL5 378 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 BTBD9Q96Q07 612 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 COQ10BQ9H8M1 238 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 VTI1BQ9UEU0 232 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 EGFL7Q9UHF1 273 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 COMMD3-BMI1R4GMX3 469 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 V9GYQ6 96 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 FAM149AA5PLN7 773 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 CASQ2O14958 399 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-221ENST00000640341 TIPRLO75663 272 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 FAM58BPP0C7Q3 252 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 SMIM18P0DKX4 95 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 GRIK1P39086 918 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 RPL5P46777 297 aaKnown RBP14.72□□□□□ -0.05
SCARB2-221ENST00000640341 PSEN2P49810 448 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 SULT2A1Q06520 285 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 CCL14Q16627 93 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 GPR158Q5T848 1215 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 CUZD1Q86UP6 607 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 B4GALNT2Q8NHY0 566 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 FAM110BQ8TC76 370 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 VAT1Q99536 393 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 TMLHEQ9NVH6 421 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 AP4S1Q9Y587 144 aa14.72□□□□□ -0.05
SCARB2-221ENST00000640341 SAC3D1A6NKF1 404 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 ANXA9O76027 345 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 F2P00734 622 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 HMBSP08397 361 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 PSMC3P17980 439 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 KLHDC10Q6PID8 442 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 SETD3Q86TU7 594 aaPredicted RBP14.71□□□□□ -0.05
SCARB2-221ENST00000640341 EMID1Q96A84 441 aaPredicted RBP14.71□□□□□ -0.05
SCARB2-221ENST00000640341 RPL10LQ96L21 214 aaKnown RBP14.71□□□□□ -0.05
SCARB2-221ENST00000640341 PPP6CO00743 305 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 STRNO43815 780 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 PAMP19021 973 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 LHX1P48742 406 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 RPS6KA3P51812 740 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 WNT3AP56704 352 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 XIAPP98170 497 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 MYLK3Q32MK0 819 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 DDIASQ8IXT1 998 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 ZFP28Q8NHY6 868 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 GPR152Q8TDT2 470 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 ANKRD49Q8WVL7 239 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 CNDP1Q96KN2 507 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 TSR3Q9UJK0 312 aaKnown RBP14.71□□□□□ -0.05
SCARB2-221ENST00000640341 ST3GAL5Q9UNP4 418 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 TCAF1Q9Y4C2 921 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 KCTD3Q9Y597 815 aa14.71□□□□□ -0.05
SCARB2-221ENST00000640341 HEMK1Q9Y5R4 338 aaPredicted RBP14.71□□□□□ -0.05
SCARB2-221ENST00000640341 TRIP12Q14669 1992 aaPredicted RBP14.71□□□□□ -0.06
SCARB2-221ENST00000640341 PRORSD1PA6NEY8 169 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 TRPC5OSA6NMA1 111 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 H3BSA7 217 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 GABRDO14764 452 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 MRASO14807 208 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 UGT1A6P19224 532 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 ATP5F1P24539 256 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 ARL1P40616 181 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 CD86P42081 329 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 GRIA3P42263 894 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 IQSEC1Q6DN90 963 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms