RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 OXTRP30559 389 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 CASQ1P31415 396 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 CNR2P34972 360 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 CD86P42081 329 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 ABL2P42684 1182 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 MAPK8P45983 427 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 NEK3P51956 506 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 ADPRHP54922 357 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 TAS2R38P59533 333 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 SKOR1P84550 965 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 RPL6Q02878 288 aaKnown RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 SIM2Q14190 667 aaPredicted RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 CCNG2Q16589 344 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 LPAL2Q16609 132 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 KCTD19Q17RG1 926 aaPredicted RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 PLK5Q496M5 336 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 RALGPS1Q5JS13 557 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 ANKRD20A2Q5SQ80 823 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 ANKRD20A1Q5TYW2 823 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 ANKRD20A3Q5VUR7 823 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 FBXL19Q6PCT2 694 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 ZC3H14Q6PJT7 736 aaKnown RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 PRR23BQ6ZRT6 265 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 PRPF39Q86UA1 669 aaKnown RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 TMEFF1Q8IYR6 380 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 PRELID2Q8N945 189 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 FAM71DQ8N9W8 422 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 OR14C36Q8NHC7 312 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 SPATA22Q8NHS9 363 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 CCDC110Q8TBZ0 833 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 ACTRT1Q8TDG2 376 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 PDCD6IPQ8WUM4 868 aaKnown RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 CAPZA3Q96KX2 299 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 ZNF641Q96N77 438 aaPredicted RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 RBM15Q96T37 977 aaKnown RBP eCLIP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 VAT1Q99536 393 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 AP1M1Q9BXS5 423 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 HDAC8Q9BY41 377 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 DUSP15Q9H1R2 295 aaPredicted RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 C6orf106Q9H6K1 298 aaPredicted RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 GLOD4Q9HC38 313 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 GGT7Q9UJ14 662 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 FZD4Q9ULV1 537 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 SAR1BQ9Y6B6 198 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 TSPAN11A1L157 253 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 PRR23AA6NEV1 266 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 SPINT1O43278 529 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 HTRA2O43464 458 aaPredicted RBP13.32□□□□□ -0.28
GTF3A-209ENST00000640289 PLRG1O43660 514 aaKnown RBP13.32□□□□□ -0.28
GTF3A-209ENST00000640289 NDUFS2O75306 463 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 SEMA4FO95754 770 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 MT-CYBP00156 380 aaPredicted RBP13.32□□□□□ -0.28
GTF3A-209ENST00000640289 SERPINF2P08697 491 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 TIMP2P16035 220 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 PRLRP16471 622 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 CES1P23141 567 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 KCNJ1P48048 391 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 SFSWAPQ12872 951 aaKnown RBP13.32□□□□□ -0.28
GTF3A-209ENST00000640289 PMS2CLQ68D20 193 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 ARMCX6Q7L4S7 300 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 PRUNE1Q86TP1 453 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 TTC7BQ86TV6 843 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 CREG2Q8IUH2 290 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 NKD2Q969F2 451 aaPredicted RBP13.32□□□□□ -0.28
GTF3A-209ENST00000640289 ECHDC3Q96DC8 303 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 IMP4Q96G21 291 aaKnown RBP13.32□□□□□ -0.28
GTF3A-209ENST00000640289 GORASP1Q9BQQ3 440 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 FRMD8P1Q9BZ68 369 aaPredicted RBP13.32□□□□□ -0.28
GTF3A-209ENST00000640289 IRF2BPLQ9H1B7 796 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 SLC25A51Q9H1U9 297 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 SGK2Q9HBY8 427 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 HAUS2Q9NVX0 235 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 UBP1Q9NZI7 540 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 DKK3Q9UBP4 350 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 RSPH14Q9UHP6 348 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 ZNF148Q9UQR1 794 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 ITM2BQ9Y287 266 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 RAI2Q9Y5P3 530 aa13.32□□□□□ -0.28
GTF3A-209ENST00000640289 SHROOM3Q8TF72 1996 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 TBC1D3DA0A087WVF3 549 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 TBC1D3IA0A087WXS9 549 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 TBC1D3EA0A087X179 549 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 TBC1D3KA0A087X1G2 549 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 CFAP69A5D8W1 941 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 TBC1D3FA6NER0 549 aaPredicted RBP13.31□□□□□ -0.28
GTF3A-209ENST00000640289 TBC1D3LB9A6J9 549 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 SLC7A4O43246 635 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 SOCS5O75159 536 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 STK10O94804 968 aaKnown RBP13.31□□□□□ -0.28
GTF3A-209ENST00000640289 PDHA1P08559 390 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 TBC1D3HP0C7X1 549 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 NBL1P41271 181 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 PTGER3P43115 390 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 PPP2CBP62714 309 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 PPP2CAP67775 309 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 SEMG2Q02383 582 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 UGP2Q16851 508 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 CFAP58Q5T655 872 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 TBC1D3GQ6DHY5 549 aa13.31□□□□□ -0.28
GTF3A-209ENST00000640289 TBC1D3CQ6IPX1 549 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms