RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 ADAMTS2O95450 1211 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 NADKO95544 446 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CYP21A2P08686 494 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 AHCYP23526 432 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 TLX1P31314 330 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 SLC1A3P43003 542 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 POLD3Q15054 466 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ZNHIT3Q15649 155 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 KLHDC10Q6PID8 442 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 MAEAQ7L5Y9 396 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 OXR1Q8N573 874 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ATG16L2Q8NAA4 619 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ANKRD52Q8NB46 1076 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 OR5H6Q8NGV6 325 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 FBXO27Q8NI29 283 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 LPPQ93052 612 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 RHBDF1Q96CC6 855 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 UCN2Q96RP3 112 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 MCMBPQ9BTE3 642 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 REPIN1Q9BWE0 567 aaKnown RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ARHGAP39Q9C0H5 1083 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 OPN3Q9H1Y3 402 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CNNM1Q9NRU3 951 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ABCD2Q9UBJ2 740 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 NOCTQ9UK39 431 aaKnown RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 COL17A1Q9UMD9 1497 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 OR2AT4A6NND4 320 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 NPC1O15118 1278 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 TIMP2P16035 220 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 SERPINH1P50454 418 aaKnown RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 HK3P52790 923 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 LRP10Q7Z4F1 713 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CAMKMTQ7Z624 323 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF786Q8N393 782 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 SETD9Q8NE22 299 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 OR2L3Q8NG85 312 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CPNE4Q96A23 557 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 TCEAL4Q96EI5 215 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CRELD1Q96HD1 420 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 PLEKHA8Q96JA3 519 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 RUSC1Q9BVN2 902 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CELF4Q9BZC1 486 aaKnown RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF518BQ9C0D4 1074 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ABCB10Q9NRK6 738 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 MDC1Q14676 2089 aaKnown RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ASTN2O75129 1339 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 hCG_2039718K7EN88 272 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF701M0R085 212 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 GPR171O14626 319 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 TO15178 435 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CLDN3O15551 220 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 UGDHO60701 494 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 IFNA4P05014 189 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ACAA1P09110 424 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CALML3P27482 149 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 HCAR3P49019 387 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 BMXP51813 675 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 LUMP51884 338 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CHN2P52757 468 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 KCNJ2P63252 427 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 DSC1Q08554 894 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 IKBKEQ14164 716 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 GPR176Q14439 515 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 DARS2Q6PI48 645 aaKnown RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF767PQ75MW2 155 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CCDC185Q8N715 623 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 NANPQ8TBE9 248 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 TPD52L3Q96J77 140 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 PFDN5Q99471 154 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 NEURL2Q9BR09 285 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 MMP27Q9H306 513 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 IFT46Q9NQC8 304 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 TBC1D13Q9NVG8 400 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF212Q9UDV6 495 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 PLXND1Q9Y4D7 1925 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CCDC141Q6ZP82 1450 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 NUAK1O60285 661 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 RECQL4O94761 1208 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 AHSA1O95433 338 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 IL15P40933 162 aaPredicted RBP4.34□□□□□ -1.72
SCN3A-209ENST00000639244 AP1S1P61966 158 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 ERVK-8P63133 956 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 USP41Q3LFD5 358 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 ZFP69Q49AA0 526 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 INTS6LQ5JSJ4 861 aaKnown RBP4.34□□□□□ -1.72
SCN3A-209ENST00000639244 SULT6B1Q6IMI4 303 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 PRR5LQ6MZQ0 368 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 SLC9A9Q8IVB4 645 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 KIAA0319LQ8IZA0 1049 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 PRR7Q8TB68 274 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF507Q8TCN5 953 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 CORO2AQ92828 525 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF333Q96JL9 665 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 LENG8Q96PV6 779 aaPredicted RBP4.34□□□□□ -1.72
SCN3A-209ENST00000639244 BTBD1Q9H0C5 482 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF275Q9NSD4 429 aaPredicted RBP4.34□□□□□ -1.72
SCN3A-209ENST00000639244 ANKRD6Q9Y2G4 727 aa4.34□□□□□ -1.72
SCN3A-209ENST00000639244 SAR1BQ9Y6B6 198 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms