RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ADAMTS20P59510 1910 aa7.96□□□□□ -1.13
PNKP-229ENST00000637897 CXorf51AA0A1B0GTR3 108 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 TMEM191CA6NGB0 347 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 C16orf96A6NNT2 1141 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 TMCO5BA8MYB1 307 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 RASA4BC9J798 803 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 C1QTNF3-AMACRE9PGA6 284 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 PRAMEF26H0Y7S4 382 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 J3KR12 359 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 ENC1O14682 589 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 MUSKO15146 869 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 RASA4O43374 803 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 BUB1BO60566 1050 aaPredicted RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 TMCC1O94876 653 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 PAK4O96013 591 aaPredicted RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 CALB1P05937 261 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 CCDC172P0C7W6 258 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 ADRB3P13945 408 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 TIMP2P16035 220 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 GM2AP17900 193 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 ITGB7P26010 798 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 EIF4A3P38919 411 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 PRKCIP41743 596 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 NSFP46459 744 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 C21orf59P57076 290 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 TUBB4BP68371 445 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 SLC20A2Q08357 652 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 EIF2B5Q13144 721 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 FZD2Q14332 565 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 ASIC2Q16515 512 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 TDRD12Q587J7 1177 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 ZNF542PQ5EBM4 170 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 TXNRD3NBQ6F5E7 133 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 RWDD4Q6NW29 188 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 NEK5Q6P3R8 708 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 FBXL19Q6PCT2 694 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 ADAT2Q7Z6V5 191 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 SLFN11Q7Z7L1 901 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 PRPF39Q86UA1 669 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 NPWQ8N729 165 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 MNS1Q8NEH6 495 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 ISG20Q96AZ6 181 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 TBC1D31Q96DN5 1066 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 CRELD1Q96HD1 420 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 KCTD15Q96SI1 283 aaPredicted RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 CDC6Q99741 560 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 SELENOOQ9BVL4 669 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 C1QTNF2Q9BXJ5 285 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 MAGEH1Q9H213 219 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 TCEAL2Q9H3H9 227 aaPredicted RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 GDF3Q9NR23 364 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 MBNL1Q9NR56 388 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 NENFQ9UMX5 172 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 DMTF1Q9Y222 760 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 APOBEC2Q9Y235 224 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 PCDHB9Q9Y5E1 797 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 NBEAQ8NFP9 2946 aa7.96□□□□□ -1.14
PNKP-229ENST00000637897 SETXQ7Z333 2677 aaKnown RBP7.96□□□□□ -1.14
PNKP-229ENST00000637897 PTPRQQ9UMZ3 2332 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 A0A1W2PNU3 283 aaPredicted RBP7.95□□□□□ -1.14
PNKP-229ENST00000637897 TMEM8BA6NDV4 472 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 TRABD2BA6NFA1 517 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 IGLON5A6NGN9 336 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 SIGLEC6O43699 453 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 AP1G1O43747 822 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 RAMP2O60895 175 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 PIAS2O75928 621 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 PEX11BO96011 259 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 GSRP00390 522 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 PRNPP04156 253 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 UGT2B4P06133 528 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 THEGLP0DJG4 465 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 FERP16591 822 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 DGKAP23743 735 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 NEK3P51956 506 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 PFN3P60673 137 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 SEMG2Q02383 582 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 KLHL30Q0D2K2 578 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 SERINC3Q13530 473 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 IHHQ14623 411 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 POLD3Q15054 466 aaPredicted RBP7.95□□□□□ -1.14
PNKP-229ENST00000637897 ASTE1Q2TB18 679 aaPredicted RBP7.95□□□□□ -1.14
PNKP-229ENST00000637897 MYLK3Q32MK0 819 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 ACBD5Q5T8D3 534 aaPredicted RBP7.95□□□□□ -1.14
PNKP-229ENST00000637897 RETSATQ6NUM9 610 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 DNAJC24Q6P3W2 148 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 SCYL2Q6P3W7 929 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 Q6ZSR6 202 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 DSG4Q86SJ6 1040 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 VPS36Q86VN1 386 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 UMODL1-AS1Q8N2C9 162 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 PELI3Q8N2H9 469 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 SLC35F6Q8N357 371 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 OR2AP1Q8NGE2 309 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 CENPTQ96BT3 561 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 KLHDC7BQ96G42 594 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 CELF6Q96J87 481 aaKnown RBP7.95□□□□□ -1.14
PNKP-229ENST00000637897 EXOC2Q96KP1 924 aa7.95□□□□□ -1.14
PNKP-229ENST00000637897 CNDP2Q96KP4 475 aaKnown RBP7.95□□□□□ -1.14
PNKP-229ENST00000637897 KLHL32Q96NJ5 620 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms