RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 TNFAIP3P21580 790 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 PRKCIP41743 596 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 YPEL5P62699 121 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 EIF2B5Q13144 721 aaKnown RBP12.89□□□□□ -0.35
CTSD-210ENST00000637381 GRM3Q14832 879 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 TMEM52BQ4KMG9 183 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 HS1BP3Q53T59 392 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 TPRG1LQ5T0D9 272 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 AFMIDQ63HM1 303 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 DCUN1D2Q6PH85 259 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 TMC6Q7Z403 805 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 PTAR1Q7Z6K3 402 aaPredicted RBP12.89□□□□□ -0.35
CTSD-210ENST00000637381 PDZD3Q86UT5 571 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 ZNF548Q8NEK5 533 aaPredicted RBP12.89□□□□□ -0.35
CTSD-210ENST00000637381 FNIP1Q8TF40 1166 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 HNRNPLLQ8WVV9 542 aaKnown RBP12.89□□□□□ -0.35
CTSD-210ENST00000637381 TBATAQ96M53 351 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 DNAJC28Q9NX36 388 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 ITM2BQ9Y287 266 aa12.89□□□□□ -0.35
CTSD-210ENST00000637381 ANKRD36A6QL64 1941 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 A0A1W2PQC6 194 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 NEMP1O14524 444 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 FFAR2O15552 330 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 OPA1O60313 960 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 PRAMEF11O60813 436 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 MT-CO3P00414 261 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 EIF2S3P41091 472 aaKnown RBP12.88□□□□□ -0.35
CTSD-210ENST00000637381 CSNK1DP48730 415 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 HCAR3P49019 387 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 RHOAP61586 193 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 AGERQ15109 404 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 ANO6Q4KMQ2 910 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 ZNF542PQ5EBM4 170 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 ERMARDQ5T6L9 678 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 ZCCHC8Q6NZY4 707 aaKnown RBP12.88□□□□□ -0.35
CTSD-210ENST00000637381 CYP4V2Q6ZWL3 525 aaPredicted RBP12.88□□□□□ -0.35
CTSD-210ENST00000637381 PSTKQ8IV42 348 aaKnown RBP12.88□□□□□ -0.35
CTSD-210ENST00000637381 TP53I13Q8NBR0 393 aaPredicted RBP12.88□□□□□ -0.35
CTSD-210ENST00000637381 ZNF641Q96N77 438 aaPredicted RBP12.88□□□□□ -0.35
CTSD-210ENST00000637381 EDEM3Q9BZQ6 932 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 SUV39H2Q9H5I1 410 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 NCKIPSDQ9NZQ3 722 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 SALL4Q9UJQ4 1053 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 PNMA8BQ9ULN7 279 aaPredicted RBP12.88□□□□□ -0.35
CTSD-210ENST00000637381 CACNA1GO43497 2377 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 LRP4O75096 1905 aa12.88□□□□□ -0.35
CTSD-210ENST00000637381 A0A1B0GTH6 734 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 LRRC53A6NM62 1247 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 SMTNL1A8MU46 457 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 H3BM21 787 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 J3KR12 359 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 INSIG1O15503 277 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 AQP9O43315 295 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 TLX3O43711 291 aaPredicted RBP12.87□□□□□ -0.35
CTSD-210ENST00000637381 BUB1BO60566 1050 aaPredicted RBP12.87□□□□□ -0.35
CTSD-210ENST00000637381 MMP20O60882 483 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 TM7SF2O76062 418 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 DESP17661 470 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 ITIH2P19823 946 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 IGFALSP35858 605 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 PEX5P50542 639 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
CTSD-210ENST00000637381 DAB2P98082 770 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 PDE1CQ14123 709 aaPredicted RBP12.87□□□□□ -0.35
CTSD-210ENST00000637381 PTK2BQ14289 1009 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 NR1I3Q14994 352 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 CA9Q16790 459 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 UGP2Q16851 508 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 ZNF571Q7Z3V5 609 aaPredicted RBP12.87□□□□□ -0.35
CTSD-210ENST00000637381 DNAAF5Q86Y56 855 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 NETO2Q8NC67 525 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 SNIP1Q8TAD8 396 aaKnown RBP12.87□□□□□ -0.35
CTSD-210ENST00000637381 BTN2A2Q8WVV5 523 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 TUBGCP5Q96RT8 1024 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 PEBP4Q96S96 227 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 BOCQ9BWV1 1114 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 SLC39A8Q9C0K1 460 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 HAUS4Q9H6D7 363 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 MBNL1Q9NR56 388 aaKnown RBP12.87□□□□□ -0.35
CTSD-210ENST00000637381 UBA2Q9UBT2 640 aaPredicted RBP12.87□□□□□ -0.35
CTSD-210ENST00000637381 AP4E1Q9UPM8 1137 aa12.87□□□□□ -0.35
CTSD-210ENST00000637381 SMG1Q96Q15 3661 aaKnown RBP12.87□□□□□ -0.35
CTSD-210ENST00000637381 EME2A4GXA9 379 aaPredicted RBP12.86□□□□□ -0.35
CTSD-210ENST00000637381 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 DDX3XO00571 662 aaKnown RBP eCLIP12.86□□□□□ -0.353e-21■■■■□ 22.5
CTSD-210ENST00000637381 NEBLO76041 1014 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 FTLP02792 175 aaPredicted RBP12.86□□□□□ -0.35
CTSD-210ENST00000637381 JUNDP17535 347 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 PSMA2P25787 234 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 PAPOLAP51003 745 aaKnown RBP12.86□□□□□ -0.35
CTSD-210ENST00000637381 ZNF135P52742 658 aaPredicted RBP12.86□□□□□ -0.35
CTSD-210ENST00000637381 TPI1P60174 286 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 NSUN2Q08J23 767 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTSD-210ENST00000637381 ELP6Q0PNE2 266 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 SOWAHCQ53LP3 525 aaPredicted RBP12.86□□□□□ -0.35
CTSD-210ENST00000637381 FIGNQ5HY92 759 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
CTSD-210ENST00000637381 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 ZNF354CQ86Y25 554 aa12.86□□□□□ -0.35
CTSD-210ENST00000637381 ARHGAP12Q8IWW6 846 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms