RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CHRNA3P32297 505 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 CXCR3P49682 368 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 CLDN6P56747 220 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 E2F1Q01094 437 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 PTPN20Q4JDL3 420 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 PIP5KL1Q5T9C9 394 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 EMBQ6PCB8 327 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 EIF1ADQ8N9N8 165 aaKnown RBP12.85□□□□□ -0.35
CTSD-208ENST00000636843 ATP11CQ8NB49 1132 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 TMEM145Q8NBT3 493 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 ZNF564Q8TBZ8 553 aaPredicted RBP12.85□□□□□ -0.35
CTSD-208ENST00000636843 AENQ8WTP8 325 aaKnown RBP12.85□□□□□ -0.35
CTSD-208ENST00000636843 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.85□□□□□ -0.355e-8■■■■■ 65.3
CTSD-208ENST00000636843 PGAP3Q96FM1 320 aaPredicted RBP12.85□□□□□ -0.35
CTSD-208ENST00000636843 KRT12Q99456 494 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 NPY6RQ99463 290 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 NUP85Q9BW27 656 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
CTSD-208ENST00000636843 STAP1Q9ULZ2 295 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 AK5Q9Y6K8 562 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 TP53BP1Q12888 1972 aaPredicted RBP12.85□□□□□ -0.35
CTSD-208ENST00000636843 DRGXA6NNA5 263 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 KRIT1O00522 736 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 CNTN5O94779 1100 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 HEXIM1O94992 359 aaKnown RBP12.84□□□□□ -0.35
CTSD-208ENST00000636843 MT-CO1P00395 513 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 PRNPP04156 253 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 CYP1A1P04798 512 aaPredicted RBP12.84□□□□□ -0.35
CTSD-208ENST00000636843 CTSLP07711 333 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 RHOCP08134 193 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 AKT2P31751 481 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 GGCXP38435 758 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 TNNT3P45378 269 aaPredicted RBP12.84□□□□□ -0.35
CTSD-208ENST00000636843 TAS2R38P59533 333 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 SLC7A5Q01650 507 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 SEMG2Q02383 582 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 ZNF211Q13398 564 aaPredicted RBP12.84□□□□□ -0.35
CTSD-208ENST00000636843 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 LRRC31Q6UY01 552 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 LRRC69Q6ZNQ3 347 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 SETD3Q86TU7 594 aaPredicted RBP12.84□□□□□ -0.35
CTSD-208ENST00000636843 ZNF683Q8IZ20 524 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 OR2A12Q8NGT7 310 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 NT5C3BQ969T7 300 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 TKTL2Q9H0I9 626 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 DYRK4Q9NR20 520 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 PIGVQ9NUD9 493 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 KLHL11Q9NVR0 708 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 CNOT8Q9UFF9 292 aaKnown RBP12.84□□□□□ -0.35
CTSD-208ENST00000636843 VPS51Q9UID3 782 aa12.84□□□□□ -0.35
CTSD-208ENST00000636843 NYNRINQ9P2P1 1898 aaKnown RBP12.84□□□□□ -0.35
CTSD-208ENST00000636843 A0A1W2PQU0 124 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 CCDC66A2RUB6 948 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 KPNA3O00505 521 aaPredicted RBP12.83□□□□□ -0.35
CTSD-208ENST00000636843 SLC31A1O15431 190 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 RRP8O43159 456 aaKnown RBP12.83□□□□□ -0.35
CTSD-208ENST00000636843 SIGLEC6O43699 453 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 TLX3O43711 291 aaPredicted RBP12.83□□□□□ -0.35
CTSD-208ENST00000636843 SNAP91O60641 907 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 THEGLP0DJG4 465 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 HNRNPA2B1P22626 353 aaKnown RBP12.83□□□□□ -0.35
CTSD-208ENST00000636843 GLDCP23378 1020 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 CTNNA2P26232 953 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 OAS2P29728 719 aaKnown RBP12.83□□□□□ -0.35
CTSD-208ENST00000636843 SCNN1AP37088 669 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 EIF2S3P41091 472 aaKnown RBP12.83□□□□□ -0.35
CTSD-208ENST00000636843 RNASE9P60153 205 aaKnown RBP12.83□□□□□ -0.35
CTSD-208ENST00000636843 MESDQ14696 234 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 ZNF284Q2VY69 593 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 ALFQ53S48 1182 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 OTUD1Q5VV17 481 aaPredicted RBP12.83□□□□□ -0.35
CTSD-208ENST00000636843 HORMAD1Q86X24 394 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 MCOLN2Q8IZK6 566 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 DCAF4L2Q8NA75 395 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 TMEM35BQ8NCS4 154 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 CAVIN3Q969G5 261 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 ARRDC3Q96B67 414 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 IFT43Q96FT9 208 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 VCPIP1Q96JH7 1222 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 C1orf74Q96LT6 269 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 BBC3Q96PG8 261 aaPredicted RBP12.83□□□□□ -0.35
CTSD-208ENST00000636843 UBL7Q96S82 380 aaPredicted RBP12.83□□□□□ -0.35
CTSD-208ENST00000636843 HDAC8Q9BY41 377 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 MED4Q9NPJ6 270 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 CLCA2Q9UQC9 943 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 CA5BQ9Y2D0 317 aa12.83□□□□□ -0.35
CTSD-208ENST00000636843 LOC400499M0QZD8 3231 aa12.83□□□□□ -0.36
CTSD-208ENST00000636843 GOLGA6L10A0A0M3HER8 536 aa12.83□□□□□ -0.36
CTSD-208ENST00000636843 K7ERQ8 282 aa12.83□□□□□ -0.36
CTSD-208ENST00000636843 TRIM38O00635 465 aa12.83□□□□□ -0.36
CTSD-208ENST00000636843 SDC3O75056 442 aa12.83□□□□□ -0.36
CTSD-208ENST00000636843 MYBL2P10244 700 aa12.83□□□□□ -0.36
CTSD-208ENST00000636843 COMTP21964 271 aa12.83□□□□□ -0.36
CTSD-208ENST00000636843 DGKAP23743 735 aa12.83□□□□□ -0.36
CTSD-208ENST00000636843 RRM1P23921 792 aa12.83□□□□□ -0.36
CTSD-208ENST00000636843 CDH5P33151 784 aaPredicted RBP12.83□□□□□ -0.36
CTSD-208ENST00000636843 RECQLP46063 649 aaPredicted RBP12.83□□□□□ -0.36
CTSD-208ENST00000636843 NSFP46459 744 aaKnown RBP12.83□□□□□ -0.36
CTSD-208ENST00000636843 GABRB2P47870 512 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms