RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MAGEB5Q9BZ81 275 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 CPEB1Q9BZB8 566 aaKnown RBP6.82□□□□□ -1.32
UPF3B-205ENST00000636792 FAM129AQ9BZQ8 928 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 MFSD1Q9H3U5 465 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 TBC1D17Q9HA65 648 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 PCDH9Q9HC56 1237 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 PAK5Q9P286 719 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 DNPEPQ9ULA0 475 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 CLEC4EQ9ULY5 219 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 MMP17Q9ULZ9 603 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 TECTAO75443 2155 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 KMT2EQ8IZD2 1858 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 EYSQ5T1H1 3165 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CCDC163A0A0D9SF12 145 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CTAGE15A4D2H0 777 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 C1QTNF3-AMACRE9PGA6 284 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 PSMD3O43242 534 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 BNIP3LO60238 219 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 RNASEH1O60930 286 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 GCATO75600 419 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 ANXA9O76027 345 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 ECEL1O95672 775 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 POP4O95707 220 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 PRNPP04156 253 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 SERPINF2P08697 491 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CTAGE8P0CG41 777 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CR2P20023 1033 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 TARSP26639 723 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 ACVRL1P37023 503 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 COILP38432 576 aaPredicted RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 SLC6A11P48066 632 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CCR3P51677 355 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 DGKEP52429 567 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 RPL26P61254 145 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CDK16Q00536 496 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 ADCY2Q08462 1091 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 AP1B1Q10567 949 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CAMK2GQ13555 558 aaPredicted RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 UBXN2BQ14CS0 331 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 FNDC3BQ53EP0 1204 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 GLE1Q53GS7 698 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 DNTTIP2Q5QJE6 756 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 FAM46CQ5VWP2 391 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CCDC70Q6NSX1 233 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 AADACL2Q6P093 401 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 DARS2Q6PI48 645 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CCDC137Q6PK04 289 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 NPNTQ6UXI9 565 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CHSY3Q70JA7 882 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CTAGE6Q86UF2 777 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 ZC3H18Q86VM9 953 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CTAGE4Q8IX94 777 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 RAVER1Q8IY67 606 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CCDC105Q8IYK2 499 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CHPFQ8IZ52 775 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CAMKK1Q8N5S9 505 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 ALLCQ8N6M5 410 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 IL17RCQ8NAC3 791 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 ATP11CQ8NB49 1132 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 SPATA4Q8NEY3 305 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 OR8D1Q8WZ84 308 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 MAGOHBQ96A72 148 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 PPP1R16AQ96I34 528 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 TEKT5Q96M29 485 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF641Q96N77 438 aaPredicted RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 FCRL5Q96RD9 977 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 LGMNQ99538 433 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 C19orf43Q9BQ61 176 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 HERPUD2Q9BSE4 406 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 FRMD8Q9BZ67 464 aaPredicted RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 GBA3Q9H227 469 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CD320Q9NPF0 282 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 EIF2B3Q9NR50 452 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 KLHL8Q9P2G9 620 aaPredicted RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 LHX3Q9UBR4 397 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 CA14Q9ULX7 337 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 RPL26L1Q9UNX3 145 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF148Q9UQR1 794 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 ATP8A1Q9Y2Q0 1164 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 AAR2Q9Y312 384 aaKnown RBP6.81□□□□□ -1.32
UPF3B-205ENST00000636792 STON1Q9Y6Q2 735 aa6.81□□□□□ -1.32
UPF3B-205ENST00000636792 XIRP2A4UGR9 3374 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 TCRBV7S2A1N4TA0A589 114 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 TSPAN11A1L157 253 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 FAM170BA6NMN3 283 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 J3KR12 359 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 SGK1O00141 431 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 RNF103O00237 685 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF185O15231 689 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 KCNN4O15554 427 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 SLC7A4O43246 635 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 SYNCRIPO60506 623 aaKnown RBP6.8□□□□□ -1.32
UPF3B-205ENST00000636792 SNAP91O60641 907 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 ALDH1A2O94788 518 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 CD160O95971 181 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 EGFP01133 1207 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 EPOP01588 193 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 HOXB2P14652 356 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 VAV1P15498 845 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 PTPN3P26045 913 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms