RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 OGDHQ02218 1023 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 CAMK2BQ13554 666 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 PPP6R3Q5H9R7 873 aaPredicted RBP18.14■□□□□ 0.49
PNKP-225ENST00000636214 LRRC73Q5JTD7 316 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 ERAP2Q6P179 960 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 ZNF571Q7Z3V5 609 aaPredicted RBP18.14■□□□□ 0.49
PNKP-225ENST00000636214 FNIP1Q8TF40 1166 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 BTN2A2Q8WVV5 523 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 CELF6Q96J87 481 aaKnown RBP18.14■□□□□ 0.49
PNKP-225ENST00000636214 EXOC2Q96KP1 924 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 SYT11Q9BT88 431 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 CPEB1Q9BZB8 566 aaKnown RBP18.14■□□□□ 0.49
PNKP-225ENST00000636214 EDEM3Q9BZQ6 932 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 KLC2Q9H0B6 622 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 SP110Q9HB58 689 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 USP29Q9HBJ7 922 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 RALYQ9UKM9 306 aaKnown RBP18.14■□□□□ 0.49
PNKP-225ENST00000636214 MFHAS1Q9Y4C4 1052 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 ZFHX4Q86UP3 3567 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 SCAMP1O15126 338 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 MMP20O60882 483 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 CSF2P04141 144 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 NME1P15531 152 aaKnown RBP18.13■□□□□ 0.49
PNKP-225ENST00000636214 JUNDP17535 347 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 PRKCIP41743 596 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 CLDN6P56747 220 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 TARDBPQ13148 414 aaKnown RBP eCLIP18.13■□□□□ 0.49
PNKP-225ENST00000636214 FZD2Q14332 565 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 RFX8Q6ZV50 586 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 NETO2Q8NC67 525 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 SNRNP25Q9BV90 132 aaKnown RBP18.13■□□□□ 0.49
PNKP-225ENST00000636214 ZWILCHQ9H900 591 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 MYO1AQ9UBC5 1043 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 CLCA2Q9UQC9 943 aa18.13■□□□□ 0.49
PNKP-225ENST00000636214 MYLKQ15746 1914 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 TMEM191CA6NGB0 347 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 DFFAO00273 331 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 TOR1BO14657 336 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 AREL1O15033 823 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 PRAMEF11O60813 436 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 PALMO75781 387 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 PIGNO95427 931 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 MIPP30301 263 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 PAPOLAP51003 745 aaKnown RBP18.12■□□□□ 0.49
PNKP-225ENST00000636214 C19orf48Q6RUI8 117 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 PSTKQ8IV42 348 aaKnown RBP18.12■□□□□ 0.49
PNKP-225ENST00000636214 ZNF548Q8NEK5 533 aaPredicted RBP18.12■□□□□ 0.49
PNKP-225ENST00000636214 HCAR2Q8TDS4 363 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 APOLD1Q96LR9 279 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 KCTD15Q96SI1 283 aaPredicted RBP18.12■□□□□ 0.49
PNKP-225ENST00000636214 KLF6Q99612 283 aaPredicted RBP18.12■□□□□ 0.49
PNKP-225ENST00000636214 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.12■□□□□ 0.49
PNKP-225ENST00000636214 WRAP53Q9BUR4 548 aaKnown RBP18.12■□□□□ 0.49
PNKP-225ENST00000636214 CINPQ9BW66 212 aaPredicted RBP18.12■□□□□ 0.49
PNKP-225ENST00000636214 ABCG4Q9H172 646 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 LRRC19Q9H756 370 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 GPR27Q9NS67 375 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 NCKIPSDQ9NZQ3 722 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 SPASTQ9UBP0 616 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 LHX3Q9UBR4 397 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 GPSM3Q9Y4H4 160 aa18.12■□□□□ 0.49
PNKP-225ENST00000636214 GOLGA6L19H0YKK7 550 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 DDX3XO00571 662 aaKnown RBP eCLIP18.11■□□□□ 0.49
PNKP-225ENST00000636214 RIOK3O14730 519 aaKnown RBP18.11■□□□□ 0.49
PNKP-225ENST00000636214 AQP9O43315 295 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 CKMT1AP12532 417 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 SKILP12757 684 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 SERPINA4P29622 427 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 ARL4AP40617 200 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 YPEL5P62699 121 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 CYTH1Q15438 398 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 BRAT1Q6PJG6 821 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 LMX1AQ8TE12 382 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 GLMNQ92990 594 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 ZNF641Q96N77 438 aaPredicted RBP18.11■□□□□ 0.49
PNKP-225ENST00000636214 NAP1L5Q96NT1 182 aaPredicted RBP18.11■□□□□ 0.49
PNKP-225ENST00000636214 DCBLD2Q96PD2 775 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 TUBGCP5Q96RT8 1024 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 IL12RB2Q99665 862 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 SLC13A1Q9BZW2 595 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 NRSN2Q9GZP1 204 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 SUV39H2Q9H5I1 410 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 ATP13A3Q9H7F0 1226 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 APOBEC3BQ9UH17 382 aaKnown RBP18.11■□□□□ 0.49
PNKP-225ENST00000636214 BZW2Q9Y6E2 419 aaKnown RBP18.11■□□□□ 0.49
PNKP-225ENST00000636214 CSNK1G3Q9Y6M4 447 aa18.11■□□□□ 0.49
PNKP-225ENST00000636214 ADAMTS20P59510 1910 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 H3BRJ5 948 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 J3KR12 359 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 K7ESM1 405 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 INSIG1O15503 277 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 NEBLO76041 1014 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 GP1BAP07359 652 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 TIMP2P16035 220 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 ERCC2P18074 760 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 IGFALSP35858 605 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 PFN3P60673 137 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 INSM1Q01101 510 aaPredicted RBP18.1■□□□□ 0.49
PNKP-225ENST00000636214 SEMG2Q02383 582 aa18.1■□□□□ 0.49
PNKP-225ENST00000636214 CA9Q16790 459 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms