RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 A0A1W2PQH9 124 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ARHGAP10A1A4S6 786 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 PRRG1O14668 218 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 IPO13O94829 963 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CBX6O95503 412 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ATP6V1C1P21283 382 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 KCNK10P57789 538 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 GFM2Q969S9 779 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 HOPXQ9BPY8 73 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CPSF2Q9P2I0 782 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 TBKBP1A7MCY6 615 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CLASP2O75122 1294 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 IGSF6O95976 241 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CDC25CP30307 473 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 GRK4P32298 578 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 LEPRP48357 1165 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ATP4BP51164 291 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 FAM189BP81408 668 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 GNA12Q03113 381 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 BNIP2Q12982 314 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CSHL1Q14406 222 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 RCN1Q15293 331 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 KIF19Q2TAC6 998 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 MBLAC2Q68D91 279 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ADAMTSL2Q86TH1 951 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 AGAP11Q8TF27 550 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ASIC4Q96FT7 647 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 TFB2MQ9H5Q4 396 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ATAD5Q96QE3 1844 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 UBA6A0AVT1 1052 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 H0Y3Z8 333 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 H0Y626 953 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 NRP1O14786 923 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 DNAJA2O60884 412 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 LPOP22079 712 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 GRIA4P48058 902 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 POLR2LP62875 67 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 PRKCZQ05513 592 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CACNB2Q08289 660 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 TBL3Q12788 808 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CDH18Q13634 790 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CAPRIN2Q6IMN6 1127 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 MYO1HQ8N1T3 1032 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 SLC25A41Q8N5S1 370 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 BLOC1S5Q8TDH9 187 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 STARD8Q92502 1023 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ACDQ96AP0 544 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ROPN1LQ96C74 230 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ADAM33Q9BZ11 813 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ARHGAP39Q9C0H5 1083 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CHRAC1Q9NRG0 131 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 XPR1Q9UBH6 696 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CXorf51AA0A1B0GTR3 108 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 COX4I1P13073 169 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 VCLP18206 1134 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CCR3P51677 355 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 FLOT2Q14254 428 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 TRMT10BQ6PF06 316 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ZC3HC1Q86WB0 502 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 LGI2Q8N0V4 545 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 OR4L1Q8NH43 312 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 TAS2R1Q9NYW7 299 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 RBBP6Q7Z6E9 1792 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 CASQ2O14958 399 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 SIN3BO75182 1162 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 LRG1P02750 347 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 GCKP35557 465 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 NAGLUP54802 743 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 PKNOX1P55347 436 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 SESN3P58005 492 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 DSC1Q08554 894 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 SLC10A2Q12908 348 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 TAF10Q12962 218 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 PCSK7Q16549 785 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 PAN2Q504Q3 1202 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 NUDT18Q6ZVK8 323 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 RTL10Q7L3V2 364 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF598Q86UK7 904 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 MAB21L3Q8N8X9 362 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 LEMD2Q8NC56 503 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 DDI1Q8WTU0 396 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 IMP4Q96G21 291 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 SLC39A8Q9C0K1 460 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 NMUR2Q9GZQ4 415 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 FAM192AQ9GZU8 254 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 AGO3Q9H9G7 860 aaKnown RBP4.59□□□□□ -1.67
SCN1A-210ENST00000635776 FAM8A1Q9UBU6 413 aa4.59□□□□□ -1.67
SCN1A-210ENST00000635776 SLC9A3R1O14745 358 aaPredicted RBP4.59□□□□□ -1.68
SCN1A-210ENST00000635776 ESR1P03372 595 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 MBL2P11226 248 aaPredicted RBP4.59□□□□□ -1.68
SCN1A-210ENST00000635776 LBPP18428 481 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 DGKAP23743 735 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 IL2P60568 153 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 ACTR3P61158 418 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF618Q5T7W0 954 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 TRIM68Q6AZZ1 485 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 TRNP1Q6NT89 227 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 METTL2BQ6P1Q9 378 aaKnown RBP4.59□□□□□ -1.68
SCN1A-210ENST00000635776 FBXO39Q8N4B4 442 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 TMA16Q96EY4 203 aaKnown RBP4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms