RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 KLQ9UEF7 1012 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 IKZF3Q9UKT9 509 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 GMFGO60234 142 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 SCGB2A1O75556 95 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 TNFAIP8O95379 198 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 BDNFP23560 247 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 MANFP55145 182 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 NR1I3Q14994 352 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF470Q6ECI4 717 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 PRR23BQ6ZRT6 265 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 KCTD8Q6ZWB6 473 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 GET4Q7L5D6 327 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 KIF2BQ8N4N8 673 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 STAG3L4Q8TBR4 150 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 PMM1Q92871 262 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ZFRQ96KR1 1074 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 SMURF2Q9HAU4 748 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 CRTAC1Q9NQ79 661 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 IFT46Q9NQC8 304 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 RSL24D1Q9UHA3 163 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 SSR3Q9UNL2 185 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 USP20Q9Y2K6 914 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 TIMM13Q9Y5L4 95 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 HYKKA2RU49 373 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ENO4A6NNW6 628 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 EIF2B2P49770 351 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 CCR3P51677 355 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 SHQ1Q6PI26 577 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 STOX1Q6ZVD7 989 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 LRRC70Q7Z2Q7 622 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 RBM23Q86U06 439 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 NKAPQ8N5F7 415 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 HJURPQ8NCD3 748 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ETNPPLQ8TBG4 499 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ADAM2Q99965 735 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 CHCHD6Q9BRQ6 235 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 AIFM2Q9BRQ8 373 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 TKTL2Q9H0I9 626 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ARMCX1Q9P291 453 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 NFASCO94856 1347 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 RIC1Q4ADV7 1423 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 GNALP38405 381 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 AVPR1BP47901 424 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 SELENOVP59797 346 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 MRPS22P82650 360 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ACVR2BQ13705 512 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 BMPR2Q13873 1038 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ATAT1Q5SQI0 421 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ZDHHC20Q5W0Z9 365 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 DENND1CQ8IV53 801 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 OFCC1Q8IZS5 231 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 RIPOR3Q96MK2 946 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 SLC38A3Q99624 504 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 IL22Q9GZX6 179 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 TSPAN16Q9UKR8 245 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 HBS1LQ9Y450 684 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 PRKAB1Q9Y478 270 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 A0A087X0B3 334 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 H0YJX3 145 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 DCKP27707 260 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 CDK7P50613 346 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 MCL1Q07820 350 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 DCTN2Q13561 401 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 MAPK11Q15759 364 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 SGCBQ16585 318 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 PIK3R6Q5UE93 754 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 CWF19L1Q69YN2 538 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 CNSTQ6PJW8 725 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 AFTPHQ6ULP2 937 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 DNAJC14Q6Y2X3 702 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 RASGRP2Q7LDG7 609 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 LRRC17Q8N6Y2 441 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 OR4A15Q8NGL6 344 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 TMEM121Q9BTD3 319 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 CELF4Q9BZC1 486 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 CCDC167Q9P0B6 97 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 SLC24A2Q9UI40 661 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 CLEC4AQ9UMR7 237 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 DHRS7Q9Y394 339 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 GRIN2DO15399 1336 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 C9J4A7 227 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ENTPD5O75356 428 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 SLC25A14O95258 325 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 GJA1P17302 382 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 NDST1P52848 882 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 OVGP1Q12889 678 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 RAB39AQ14964 217 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 LARS2Q15031 903 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 TRMT5Q32P41 509 aaKnown RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 STXBP5Q5T5C0 1151 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 NUP54Q7Z3B4 507 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 TXNRD3Q86VQ6 643 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 DEFB107AQ8IZN7 70 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 USP38Q8NB14 1042 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 CKAP2Q8WWK9 683 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 HTR3CQ8WXA8 447 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 AP2M1Q96CW1 435 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 DCLRE1BQ9H816 532 aa5.59□□□□□ -1.51
SCN1A-209ENST00000635750 EPB41L4AQ9HCS5 686 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-209ENST00000635750 ENY2Q9NPA8 101 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms