RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 KIAA1324Q6UXG2 1013 aaKnown RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 DSTYKQ6XUX3 929 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 H1FNTQ75WM6 255 aaPredicted RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 TMEM200AQ86VY9 491 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 C2CD5Q86YS7 1000 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC44A2Q8IWA5 706 aaPredicted RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 FAM217AQ8IXS0 508 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 DDIASQ8IXT1 998 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 LAS2Q8IYD9 372 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ADGRF3Q8IZF5 1079 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 SPICE1Q8N0Z3 855 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 GHDCQ8N2G8 530 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 GALNT15Q8N3T1 639 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 TMEM217Q8N7C4 229 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ANKRD44Q8N8A2 993 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ANKRD42Q8N9B4 389 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF485Q8NCK3 441 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 CMASQ8NFW8 434 aaPredicted RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 OR1N1Q8NGS0 311 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 OR6Y1Q8NGX8 325 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 CEP70Q8NHQ1 597 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 STAMQ92783 540 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 COG8Q96MW5 612 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 PIGSQ96S52 555 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 EPYCQ99645 322 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 GDF15Q99988 308 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ARPC5LQ9BPX5 153 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 KATNAL1Q9BW62 490 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 C1QTNF5Q9BXJ0 243 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 HDHD5Q9BXW7 423 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 CADM1Q9BY67 442 aaKnown RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF700Q9H0M5 742 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ISCUQ9H1K1 167 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 MAGEH1Q9H213 219 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 TP63Q9H3D4 680 aaPredicted RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 PLEKHA2Q9HB19 425 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF304Q9HCX3 659 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 SAYSD1Q9NPB0 183 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC52A1Q9NWF4 448 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 KIF17Q9P2E2 1029 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 GRHPRQ9UBQ7 328 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 DAPP1Q9UN19 280 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 C19orf53Q9UNZ5 99 aaPredicted RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ZBTB1Q9Y2K1 713 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 RRP7AQ9Y3A4 280 aaKnown RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 RAP2CQ9Y3L5 183 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 COPG1Q9Y678 874 aaKnown RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 MORC2Q9Y6X9 1032 aaPredicted RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 DAPK1P53355 1430 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 PTPRUQ92729 1446 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 CNTLNQ9NXG0 1405 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 NRXN2Q9P2S2 1712 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 TNRQ92752 1358 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 PSME4Q14997 1843 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 SPATA31A5Q5VU36 1347 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 SPATA31A7Q8IWB4 1347 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF644Q9H582 1327 aaPredicted RBP1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 MED14O60244 1454 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 ADGRL2O95490 1459 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 BCL9LQ86UU0 1499 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 NLRP1Q9C000 1473 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 UBR2Q8IWV8 1755 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 MYH8P13535 1937 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 ALPK3Q96L96 1907 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 LOC105369274A0A096LPK9 316 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 LOC102724159A0A0B4J2E5 919 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 LOC102723532A0A0G2JNH3 316 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 A0A1B0GU03 582 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 FOXO6A8MYZ6 492 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 MCIDASD6RGH6 385 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 STMND1H3BQB6 276 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 GRM8O00222 908 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 IPO5O00410 1097 aaKnown RBP1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 PEX12O00623 359 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 NPHP1O15259 732 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 IRAK2O43187 625 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 HNRNPRO43390 633 aaKnown RBP1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 RGS14O43566 566 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC25A17O43808 307 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 ZG16O60844 167 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 TCEA3O75764 348 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 HEXIM1O94992 359 aaKnown RBP1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 ZFYVE9O95405 1425 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 PAK4O96013 591 aaPredicted RBP1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 IL1AP01583 271 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 HLA-DQA2P01906 255 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 FCGR1AP12314 374 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 FCGR2AP12318 317 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 LYL1P12980 280 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 CHN1P15882 459 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC16A2P36021 539 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 STAT1P42224 750 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 SKIV2L2P42285 1042 aaKnown RBP1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 HALP42357 657 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 SOX2P48431 317 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 OAZ1P54368 228 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 ADPRHP54922 357 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 HDAC4P56524 1084 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 ACSM2AQ08AH3 577 aa1.19□□□□□ -2.22
SMARCB1-209ENST00000635578 Q0VFX4 171 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms