RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 CLN6Q9NWW5 311 aa6.48□□□□□ -1.37
SRGAP1-207ENST00000631006 WHRNQ9P202 907 aa6.48□□□□□ -1.37
SRGAP1-207ENST00000631006 PTGFRNQ9P2B2 879 aa6.48□□□□□ -1.37
SRGAP1-207ENST00000631006 DMGDHQ9UI17 866 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-207ENST00000631006 PCDHGB5Q9Y5G0 923 aa6.48□□□□□ -1.37
SRGAP1-207ENST00000631006 CPS1P31327 1500 aa6.48□□□□□ -1.37
SRGAP1-207ENST00000631006 PTPRAP18433 802 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 MYL9P24844 172 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 TTPAP49638 278 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 PSMD7P51665 324 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 NEK3P51956 506 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 TBX2Q13207 712 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 DNAJC3Q13217 504 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 CELF3Q5SZQ8 465 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 CERCAMQ5T4B2 595 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 UBR7Q8N806 425 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 USP38Q8NB14 1042 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 HEXDCQ8WVB3 486 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 SEC16BQ96JE7 1060 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ACE2Q9BYF1 805 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 SEMA3GQ9NS98 782 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ACKR2O00590 384 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 DNALI1O14645 258 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 VIL1P09327 827 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ETS1P14921 441 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 NT5EP21589 574 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 PDHA2P29803 388 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 DNASE1L1P49184 302 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 DGKEP52429 567 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 UGT2B15P54855 530 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 RAB25P57735 213 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ZNF268Q14587 947 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 SAMD4BQ5PRF9 694 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 DAGLBQ8NCG7 672 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 FATE1Q969F0 183 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 PRDM8Q9NQV8 689 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 TAGLN3Q9UI15 199 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 MGAT4AQ9UM21 535 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 PCDHGC5Q9Y5F6 944 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 GPC6Q9Y625 555 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 MYH6P13533 1939 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 CD163L1Q9NR16 1453 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 WASHC1A8K0Z3 465 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 WASH3PC4AMC7 463 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 CHP2O43745 196 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 NTRK1P04629 796 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 KLRK1P26718 216 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 PPP4CP60510 307 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 SRP54P61011 504 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 NR1I3Q14994 352 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 TAB1Q15750 504 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 AMZ1Q400G9 498 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ATP13A5Q4VNC0 1218 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ZC3H12AQ5D1E8 599 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 WASH2PQ6VEQ5 465 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ZBTB49Q6ZSB9 765 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 PACS2Q86VP3 889 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 SCUBE1Q8IWY4 988 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 MPP5Q8N3R9 675 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 KIF2BQ8N4N8 673 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 NKAPQ8N5F7 415 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ZSWIM2Q8NEG5 633 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 MAGEE2Q8TD90 523 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 PPP1R13LQ8WUF5 828 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 RNF145Q96MT1 663 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 GAL3ST4Q96RP7 486 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ZNF607Q96SK3 696 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 NT5C1B-RDH14C9J2C7 533 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 LIN7AO14910 233 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 CYP17A1P05093 508 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 CMPK1P30085 196 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 SLC26A3P40879 764 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 CAPZA1P52907 286 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 OC90Q02509 493 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ELP6Q0PNE2 266 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 N4BP2L1Q5TBK1 243 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 DHFR2Q86XF0 187 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 TBCBQ99426 244 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 TTPALQ9BTX7 342 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 PLEKHA1Q9HB21 404 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 EXD2Q9NVH0 621 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ABCA9Q8IUA7 1624 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 C1orf167Q5SNV9 1468 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 CPED1A4D0V7 1026 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 WNT10BO00744 389 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 PER2O15055 1255 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 SIN3BO75182 1162 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 SNX4O95219 450 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 SELPP16109 830 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 ITGA2P17301 1181 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 CCNA2P20248 432 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 CCKBRP32239 447 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 MCL1Q07820 350 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 EPS8Q12929 822 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 SLC29A2Q14542 456 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 MTF1Q14872 753 aa6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 INO80DQ53TQ3 878 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-207ENST00000631006 OTUD3Q5T2D3 398 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms