RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 ASB16Q96NS5 453 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 PSKH2Q96QS6 385 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 MGME1Q9BQP7 344 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 TRIM56Q9BRZ2 755 aaKnown RBP10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 BBS2Q9BXC9 721 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 FSD1LQ9BXM9 530 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 PLAC1Q9HBJ0 212 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 VPS45Q9NRW7 570 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 HAUS2Q9NVX0 235 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 DUS2Q9NX74 493 aaKnown RBP10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 BFARQ9NZS9 450 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 CLEC1BQ9P126 229 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 VPS51Q9UID3 782 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 ZMIZ1Q9ULJ6 1067 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 LAMA3Q16787 3333 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 TCRBV9S1A1TA0A576 114 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 HMGB1P1B2RPK0 211 aaPredicted RBP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 POC1B-GALNT4F8VUJ3 575 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 AP3B1O00203 1094 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 POLR3GO15318 223 aaPredicted RBP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 RGS16O15492 202 aaPredicted RBP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 SPAG6O75602 509 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 TCEA3O75764 348 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 TMCC1O94876 653 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 GSTA2P09210 222 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 TYRP14679 529 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 HOXB8P17481 243 aaPredicted RBP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 PGAM1P18669 254 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 GCAP28676 217 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 HLA-FP30511 346 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 STX2P32856 288 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 RGRP47804 291 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 PLK1P53350 603 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 EFTUD2Q15029 972 aaKnown RBP eCLIP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 DHCR24Q15392 516 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 KLHL38Q2WGJ6 581 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 PLEKHG6Q3KR16 790 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 INO80DQ53TQ3 878 aaPredicted RBP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 PITRM1Q5JRX3 1037 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 ATAT1Q5SQI0 421 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 TRIM68Q6AZZ1 485 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 ALG1LQ6GMV1 187 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 DENND5AQ6IQ26 1287 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 RETSATQ6NUM9 610 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 EP400NLQ6ZTU2 488 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 KDELC2Q7Z4H8 507 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 CCNJLQ8IV13 435 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 SH2D3CQ8N5H7 860 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 SLC25A41Q8N5S1 370 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 ST13P5Q8NFI4 369 aaPredicted RBP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 GSDMBQ8TAX9 411 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 BPIFB1Q8TDL5 484 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 OSCP1Q8WVF1 389 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 TADA1Q96BN2 335 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 MRRFQ96E11 262 aaKnown RBP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 EXOC2Q96KP1 924 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 XPO6Q96QU8 1125 aaKnown RBP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 C2orf49Q9BVC5 232 aaPredicted RBP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 ACSS3Q9H6R3 686 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 ABCB8Q9NUT2 735 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 CLDND1Q9NY35 253 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 GDE1Q9NZC3 331 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 LMCD1Q9NZU5 365 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 MARK1Q9P0L2 795 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 SAMD15Q9P1V8 674 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 VPS18Q9P253 973 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 CTNNAL1Q9UBT7 734 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 INTS6Q9UL03 887 aaKnown RBP10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 PCDHGA11Q9Y5H2 935 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 CDH23Q9H251 3354 aa10.05□□□□□ -0.8
SOX2-OT-244ENST00000627738 HEPACAM2A8MVW5 462 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 INSIG1O15503 277 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 TBX10O75333 385 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 PIAS1O75925 651 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 MT-CO1P00395 513 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 SERPINF2P08697 491 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 CR2P20023 1033 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 CHRNA4P43681 627 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 RGS19P49795 217 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 SCNN1BP51168 640 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 GEMIN4P57678 1058 aaKnown RBP10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 RHOAP61586 193 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 CBX1P83916 185 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 DLX2Q07687 328 aaPredicted RBP10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 SLC12A1Q13621 1099 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 GRIN2CQ14957 1233 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 STEAP4Q687X5 459 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 CES5AQ6NT32 575 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 CES3Q6UWW8 571 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 RANBP10Q6VN20 620 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 KIAA1958Q8N8K9 716 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 NAT16Q8N8M0 369 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 ACDQ96AP0 544 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 ASIC4Q96FT7 647 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 IFT43Q96FT9 208 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 PGM2Q96G03 612 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 PKNOX2Q96KN3 472 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 CYTH2Q99418 400 aa10.04□□□□□ -0.8
SOX2-OT-244ENST00000627738 NAT9Q9BTE0 207 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms