RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 XPAP23025 273 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-208ENST00000626828 CCNCP24863 283 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 GARSP41250 739 aaKnown RBP16.93■□□□□ 0.3
UBE3D-208ENST00000626828 BCL2L1Q07817 233 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 GALNT2Q10471 571 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 OVGP1Q12889 678 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 SGCGQ13326 291 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 HNRNPDQ14103 355 aaKnown RBP16.93■□□□□ 0.3
UBE3D-208ENST00000626828 ZNF235Q14590 738 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 IFI16Q16666 785 aaKnown RBP16.93■□□□□ 0.3
UBE3D-208ENST00000626828 ZNF284Q2VY69 593 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 BRAT1Q6PJG6 821 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 IQCHQ86VS3 1027 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 CAMK1DQ8IU85 385 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 TXLNBQ8N3L3 684 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 OR2I1PQ8NGU4 316 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 KLK6Q92876 244 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 TSGA13Q96PP4 275 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 TFR2Q9UP52 801 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 ZFR2Q9UPR6 939 aaKnown RBP16.93■□□□□ 0.3
UBE3D-208ENST00000626828 HYOU1Q9Y4L1 999 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 SNX11Q9Y5W9 270 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 CACNA1AO00555 2505 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.92■□□□□ 0.3
UBE3D-208ENST00000626828 C3orf70A6NLC5 250 aaPredicted RBP16.92■□□□□ 0.3
UBE3D-208ENST00000626828 BTNL10A8MVZ5 291 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 TLR4O00206 839 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 WNT9AO14904 365 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 AREL1O15033 823 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 PJA2O43164 708 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 GJB3O75712 270 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 WNT1P04628 370 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 ZNF883P0CG24 379 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 CSRP1P21291 193 aaKnown RBP16.92■□□□□ 0.3
UBE3D-208ENST00000626828 SERPINA4P29622 427 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 AKT2P31751 481 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 ABL2P42684 1182 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 CTSKP43235 329 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 RGRP47804 291 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 NAP1L1P55209 391 aaKnown RBP16.92■□□□□ 0.3
UBE3D-208ENST00000626828 GSDMDP57764 484 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 AP1S1P61966 158 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 POLR2LP62875 67 aaKnown RBP16.92■□□□□ 0.3
UBE3D-208ENST00000626828 FOXK2Q01167 660 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 TMEM259Q4ZIN3 620 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 RALGPS1Q5JS13 557 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 CFAP58Q5T655 872 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 TIGD7Q6NT04 549 aaPredicted RBP16.92■□□□□ 0.3
UBE3D-208ENST00000626828 C11orf63Q6NUN7 778 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 FAM174AQ8TBP5 190 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.92■□□□□ 0.3
UBE3D-208ENST00000626828 ASB12Q8WXK4 309 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 FATE1Q969F0 183 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 RNF25Q96BH1 459 aaPredicted RBP16.92■□□□□ 0.3
UBE3D-208ENST00000626828 C1QTNF2Q9BXJ5 285 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 SLC32A1Q9H598 525 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.92■□□□□ 0.3
UBE3D-208ENST00000626828 HS3ST3A1Q9Y663 406 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 PLXNA2O75051 1894 aa16.92■□□□□ 0.3
UBE3D-208ENST00000626828 TSPAN11A1L157 253 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 RCCD1A6NED2 376 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 MUSKO15146 869 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 MATN3O15232 486 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 PSTPIP1O43586 416 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 MFSD11O43934 449 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 PIGNO95427 931 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 PAK4O96013 591 aaPredicted RBP16.91■□□□□ 0.3
UBE3D-208ENST00000626828 KRT1P04264 644 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 HNRNPA2B1P22626 353 aaKnown RBP16.91■□□□□ 0.3
UBE3D-208ENST00000626828 CES1P23141 567 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 MMP13P45452 471 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 VAV2P52735 878 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 ELP6Q0PNE2 266 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 SLC10A2Q12908 348 aaPredicted RBP16.91■□□□□ 0.3
UBE3D-208ENST00000626828 SUZ12Q15022 739 aaKnown RBP16.91■□□□□ 0.3
UBE3D-208ENST00000626828 UGP2Q16851 508 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 SEL1L3Q68CR1 1132 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 SLC9A4Q6AI14 798 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 DAAM2Q86T65 1068 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 KIAA1328Q86T90 577 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 TMEM139Q8IV31 216 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 RCOR2Q8IZ40 523 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 TEX26Q8N6G2 289 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 TPCN2Q8NHX9 752 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 KLHDC7BQ96G42 594 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 ZNF830Q96NB3 372 aaPredicted RBP16.91■□□□□ 0.3
UBE3D-208ENST00000626828 NUDCD1Q96RS6 583 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 HAUS2Q9NVX0 235 aa16.91■□□□□ 0.3
UBE3D-208ENST00000626828 REXO2Q9Y3B8 237 aaKnown RBP16.91■□□□□ 0.3
UBE3D-208ENST00000626828 A0A1W2PQ67 120 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 IGLON5A6NGN9 336 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 APOL1O14791 398 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 ZRANB2O95218 330 aaKnown RBP eCLIP16.9■□□□□ 0.3
UBE3D-208ENST00000626828 KCNK5O95279 499 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 CEACAM1P13688 526 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 CD59P13987 128 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 PRLRP16471 622 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 GBE1Q04446 702 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 ZNF423Q2M1K9 1284 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 TMEM52BQ4KMG9 183 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 282.5 ms