RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 PRPF39Q86UA1 669 aaKnown RBP8.61□□□□□ -1.03
SGMS1-211ENST00000626236 CACUL1Q86Y37 369 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 JAMLQ86YT9 394 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 MMAAQ8IVH4 418 aaKnown RBP8.61□□□□□ -1.03
SGMS1-211ENST00000626236 MMGT1Q8N4V1 131 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 PAF1Q8N7H5 531 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 LRRN4CLQ8ND94 238 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 OR2T3Q8NH03 318 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 PBXIP1Q96AQ6 731 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 NSMCE3Q96MG7 304 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 FAM129BQ96TA1 746 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 GORASP1Q9BQQ3 440 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 HEPHQ9BQS7 1158 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 TRIM31Q9BZY9 425 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 ATP13A3Q9H7F0 1226 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 ETNK1Q9HBU6 452 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 POLMQ9NP87 494 aaPredicted RBP8.61□□□□□ -1.03
SGMS1-211ENST00000626236 C2orf42Q9NWW7 574 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 NEU2Q9Y3R4 380 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 MYLKQ15746 1914 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 KMT2EQ8IZD2 1858 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 GOLGA6CA6NDK9 693 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 GOLGA6BA6NDN3 693 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 FAM187AA6NFU0 413 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 E7EVH7 732 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 C1QTNF3-AMACRE9PGA6 284 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 C3orf80F5H4A9 247 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 PMPCBO75439 489 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 ANXA9O76027 345 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 SLU7O95391 586 aaKnown RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 PRNPP04156 253 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 GOLGA6DP0CG33 693 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 CA4P22748 312 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 MAGEA9P43362 315 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 DGKEP52429 567 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 COPAP53621 1224 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 GEMP55040 296 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 PRSS12P56730 875 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 TRAF2Q12933 501 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 MTAPQ13126 283 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 IHHQ14623 411 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 CRY1Q16526 586 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 POM121L1PQ3SYA9 428 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 CFAP58Q5T655 872 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 ZNF776Q68DI1 518 aaPredicted RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 GDPD4Q6W3E5 623 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 KDELC2Q7Z4H8 507 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 DSG4Q86SJ6 1040 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 CAMK1DQ8IU85 385 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 SPNS2Q8IVW8 549 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 SPEM1Q8N4L4 309 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 TMIEQ8NEW7 156 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 TSTD1Q8NFU3 115 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 IPMKQ8NFU5 416 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 PIP4K2CQ8TBX8 421 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 CCHCR1Q8TD31 782 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 PDCD6IPQ8WUM4 868 aaKnown RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 HMGB4Q8WW32 186 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 IFT43Q96FT9 208 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 OXNAD1Q96HP4 312 aaPredicted RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 KLHL32Q96NJ5 620 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 PPP1R2P1Q96PQ5 205 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 HHIPQ96QV1 700 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 TUBGCP5Q96RT8 1024 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 IER2Q9BTL4 223 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 LRRC1Q9BTT6 524 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 MLPHQ9BV36 600 aaPredicted RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 FSD1LQ9BXM9 530 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 COL25A1Q9BXS0 654 aaPredicted RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 TDRD1Q9BXT4 1180 aaKnown RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 OSBPL1AQ9BXW6 950 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 CPEB1Q9BZB8 566 aaKnown RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 SLC6A17Q9H1V8 727 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 RSPH9Q9H1X1 276 aaPredicted RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 EPHX3Q9H6B9 360 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 FBRSQ9HAH7 460 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 CD248Q9HCU0 757 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 RAB6BQ9NRW1 208 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 GOLGA6AQ9NYA3 693 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 DLGAP2Q9P1A6 1054 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 BCCIPQ9P287 314 aaKnown RBP eCLIP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 FAM153AQ9UHL3 310 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 SARDHQ9UL12 918 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 AAR2Q9Y312 384 aaKnown RBP8.6□□□□□ -1.03
SGMS1-211ENST00000626236 PCDHGC4Q9Y5F7 938 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 RAI2Q9Y5P3 530 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 A0A0C4DFX4 3053 aa8.6□□□□□ -1.03
SGMS1-211ENST00000626236 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.59□□□□□ -1.03
SGMS1-211ENST00000626236 FAM86C2PA6NEL3 165 aa8.59□□□□□ -1.03
SGMS1-211ENST00000626236 EFCAB8A8MWE9 144 aa8.59□□□□□ -1.03
SGMS1-211ENST00000626236 KPNA3O00505 521 aaPredicted RBP8.59□□□□□ -1.03
SGMS1-211ENST00000626236 MID1O15344 667 aa8.59□□□□□ -1.03
SGMS1-211ENST00000626236 SOCS5O75159 536 aa8.59□□□□□ -1.03
SGMS1-211ENST00000626236 HEXIM1O94992 359 aaKnown RBP8.59□□□□□ -1.03
SGMS1-211ENST00000626236 ADH1BP00325 375 aa8.59□□□□□ -1.03
SGMS1-211ENST00000626236 DNTTP04053 509 aa8.59□□□□□ -1.03
SGMS1-211ENST00000626236 APRTP07741 180 aa8.59□□□□□ -1.03
SGMS1-211ENST00000626236 NDUFV2P19404 249 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms