RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 TPD52L2O43399 206 aaKnown RBP3.48□□□□□ -1.85
VBP1-204ENST00000625964 ATP2C2O75185 946 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 PGM1P36871 562 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 CENPAP49450 140 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 CCR5P51681 352 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 CLCN5P51795 746 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 CHRNDQ07001 517 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 RUNX2Q13950 521 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 PLCB4Q15147 1175 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 SHBQ15464 509 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 TDRD12Q587J7 1177 aaKnown RBP3.48□□□□□ -1.85
VBP1-204ENST00000625964 C8orf82Q6P1X6 216 aaPredicted RBP3.48□□□□□ -1.85
VBP1-204ENST00000625964 SLC22A25Q6T423 547 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 BBS12Q6ZW61 710 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 MOB3CQ70IA8 216 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 ZNF354CQ86Y25 554 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 LSM14AQ8ND56 463 aaKnown RBP3.48□□□□□ -1.85
VBP1-204ENST00000625964 MCPH1Q8NEM0 835 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 TMEM170AQ8WVE7 144 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 RUFY2Q8WXA3 655 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 HERVK_113Q902F9 699 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 TXNDC15Q96J42 360 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 UBXN10Q96LJ8 280 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 MSTO1Q9BUK6 570 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 PHF7Q9BWX1 381 aaPredicted RBP3.48□□□□□ -1.85
VBP1-204ENST00000625964 TMEM51Q9NW97 253 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 RRN3Q9NYV6 651 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 PCDHGB5Q9Y5G0 923 aa3.48□□□□□ -1.85
VBP1-204ENST00000625964 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.47□□□□□ -1.85
VBP1-204ENST00000625964 LINC01553A4QN01 128 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 PABPN1LA6NDY0 278 aaKnown RBP3.47□□□□□ -1.85
VBP1-204ENST00000625964 SOX30O94993 753 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 PAPSS2O95340 614 aaPredicted RBP3.47□□□□□ -1.85
VBP1-204ENST00000625964 GLUD1P00367 558 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 ITGB8P26012 769 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 C21orf33P30042 268 aaPredicted RBP3.47□□□□□ -1.85
VBP1-204ENST00000625964 TTKP33981 857 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 LIFRP42702 1097 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 AMTP48728 403 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 GLUD2P49448 558 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 BLKP51451 505 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 YWHAZP63104 245 aaKnown RBP3.47□□□□□ -1.85
VBP1-204ENST00000625964 DDR1Q08345 913 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 CTTNQ14247 550 aaKnown RBP3.47□□□□□ -1.85
VBP1-204ENST00000625964 LPIN1Q14693 890 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 HLFQ16534 295 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 NFIL3Q16649 462 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 PLEKHO1Q53GL0 409 aaPredicted RBP3.47□□□□□ -1.85
VBP1-204ENST00000625964 TYW3Q6IPR3 259 aaKnown RBP3.47□□□□□ -1.85
VBP1-204ENST00000625964 CES5AQ6NT32 575 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 RETSATQ6NUM9 610 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 C17orf99Q6UX52 265 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 CYP26C1Q6V0L0 522 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 MB21D2Q8IYB1 491 aaPredicted RBP3.47□□□□□ -1.85
VBP1-204ENST00000625964 CPXCR1Q8N123 301 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 ZMIZ2Q8NF64 920 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 MYRIPQ8NFW9 859 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 GPR63Q9BZJ6 419 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 TM6SF1Q9BZW5 370 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 CDT1Q9H211 546 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 TTYH1Q9H313 450 aaPredicted RBP3.47□□□□□ -1.85
VBP1-204ENST00000625964 IL1RAPL1Q9NZN1 696 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 PEMTQ9UBM1 199 aa3.47□□□□□ -1.85
VBP1-204ENST00000625964 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 EBAG9O00559 213 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 KCNJ13O60928 360 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 GUCY1B2O75343 617 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 EIF3JO75822 258 aaKnown RBP3.46□□□□□ -1.86
VBP1-204ENST00000625964 SERPINI2O75830 405 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 ZNF432O94892 652 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 POLBP06746 335 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 SLC2A4P14672 509 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 MYF6P23409 242 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 GPD2P43304 727 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 MAPK9P45984 424 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 HDAC4P56524 1084 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 DSCR9P59020 149 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.46□□□□□ -1.86
VBP1-204ENST00000625964 TRAF2Q12933 501 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 DCAF6Q58WW2 860 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 ZNF667Q5HYK9 610 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 NADSYN1Q6IA69 706 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 CREB3L2Q70SY1 520 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 RBM23Q86U06 439 aaKnown RBP3.46□□□□□ -1.86
VBP1-204ENST00000625964 FAM160B2Q86V87 743 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 CCDC105Q8IYK2 499 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 TNIP2Q8NFZ5 429 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 NOC3LQ8WTT2 800 aaKnown RBP3.46□□□□□ -1.86
VBP1-204ENST00000625964 FAM216AQ8WUB2 273 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 TMED6Q8WW62 240 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 WBP2Q969T9 261 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 ELP4Q96EB1 424 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 NUF2Q9BZD4 464 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 CLK4Q9HAZ1 481 aaKnown RBP3.46□□□□□ -1.86
VBP1-204ENST00000625964 ANKRD10Q9NXR5 420 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 CNOT7Q9UIV1 285 aaKnown RBP3.46□□□□□ -1.86
VBP1-204ENST00000625964 MMP24Q9Y5R2 645 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 ADGRF5Q8IZF2 1346 aa3.46□□□□□ -1.86
VBP1-204ENST00000625964 CBY3A6NI87 242 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 RRN3P2A6NIE6 340 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms