RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 GPT2Q8TD30 523 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 SLC20A1Q8WUM9 679 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 RAB7BQ96AH8 199 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 CCDC3Q9BQI4 270 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 NDST4Q9H3R1 872 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 SPASTQ9UBP0 616 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 APOBEC3BQ9UH17 382 aaKnown RBP11.2□□□□□ -0.62
DDX41-218ENST00000625286 PADI4Q9UM07 663 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 ARHGEF17Q96PE2 2063 aaPredicted RBP11.2□□□□□ -0.62
DDX41-218ENST00000625286 CXorf51AA0A1B0GTR3 108 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 A0A1W2PQM1 296 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 TCEA3O75764 348 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 LRIG2O94898 1065 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 POP4O95707 220 aaKnown RBP11.19□□□□□ -0.62
DDX41-218ENST00000625286 GSRP00390 522 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 RHOQP17081 205 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 BPIFB4P59827 614 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 NRG1Q02297 640 aaPredicted RBP11.19□□□□□ -0.62
DDX41-218ENST00000625286 RAPGEF1Q13905 1077 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 MAN2A1Q16706 1144 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 KLHL40Q2TBA0 621 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 WSCD2Q2TBF2 565 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 VWA3BQ502W6 1294 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 ACBD5Q5T8D3 534 aaPredicted RBP11.19□□□□□ -0.62
DDX41-218ENST00000625286 NAA35Q5VZE5 725 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 TTC7BQ86TV6 843 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 PYROXD2Q8N2H3 581 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 CCDC185Q8N715 623 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 DENND6BQ8NEG7 585 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 TPCN2Q8NHX9 752 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 WDR36Q8NI36 951 aaKnown RBP11.19□□□□□ -0.62
DDX41-218ENST00000625286 RXFP2Q8WXD0 754 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 CENPIQ92674 756 aaPredicted RBP11.19□□□□□ -0.62
DDX41-218ENST00000625286 TSACCQ96A04 125 aaPredicted RBP11.19□□□□□ -0.62
DDX41-218ENST00000625286 GRAMD1AQ96CP6 724 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 MED8Q96G25 268 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 WRAP53Q9BUR4 548 aaKnown RBP11.19□□□□□ -0.62
DDX41-218ENST00000625286 METTL5Q9NRN9 209 aaKnown RBP11.19□□□□□ -0.62
DDX41-218ENST00000625286 TMEM248Q9NWD8 314 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 NOCTQ9UK39 431 aaKnown RBP11.19□□□□□ -0.62
DDX41-218ENST00000625286 COQ6Q9Y2Z9 468 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 PAXBP1Q9Y5B6 917 aa11.19□□□□□ -0.62
DDX41-218ENST00000625286 PTPN13Q12923 2485 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 UBR5O95071 2799 aaPredicted RBP11.18□□□□□ -0.62
DDX41-218ENST00000625286 C2CD4BA6NLJ0 364 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 NEMP1O14524 444 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 KDELR3O43731 214 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 LSM8O95777 96 aaKnown RBP11.18□□□□□ -0.62
DDX41-218ENST00000625286 CYP1A1P04798 512 aaPredicted RBP11.18□□□□□ -0.62
DDX41-218ENST00000625286 ANXA6P08133 673 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 PLEKP08567 350 aaPredicted RBP11.18□□□□□ -0.62
DDX41-218ENST00000625286 HGFP14210 728 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 THOP1P52888 689 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 HDAC4P56524 1084 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 YPEL5P62699 121 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 CCL7P80098 99 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 PTP4A2Q12974 167 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 IRF4Q15306 451 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 CDO1Q16878 200 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 ALG11Q2TAA5 492 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 FAXCQ5TGI0 409 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 RWDD4Q6NW29 188 aaKnown RBP11.18□□□□□ -0.62
DDX41-218ENST00000625286 GDPD4Q6W3E5 623 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 MACC1Q6ZN28 852 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 ZSWIM9Q86XI8 627 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 KYQ8NBH2 561 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 SLC30A5Q8TAD4 765 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 EPS8L1Q8TE68 723 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 BTN2A2Q8WVV5 523 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 CCDC74AQ96AQ1 378 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 TBATAQ96M53 351 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 PCDHB18PQ96TA0 734 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 EPAS1Q99814 870 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 TUBGCP2Q9BSJ2 902 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 FOXP3Q9BZS1 431 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 MAGEH1Q9H213 219 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 PDCL3Q9H2J4 239 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 NCKIPSDQ9NZQ3 722 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 SIRPGQ9P1W8 387 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 GULP1Q9UBP9 304 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 FLNCQ14315 2725 aa11.18□□□□□ -0.62
DDX41-218ENST00000625286 ANKRD36A6QL64 1941 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 RELNP78509 3460 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 CCDC187A0A096LP49 1063 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 CAPN8A6NHC0 703 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 F8VZ95 297 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 BUB1BO60566 1050 aaPredicted RBP11.17□□□□□ -0.62
DDX41-218ENST00000625286 TM7SF2O76062 418 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 TMCC1O94876 653 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 ITGA2BP08514 1039 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 UCHL3P15374 230 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 MMP8P22894 467 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 SLC5A2P31639 672 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 UGT1A5P35504 534 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 MAPKAPK2P49137 400 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 KLK7P49862 253 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 HK3P52790 923 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 SNRPD1P62314 119 aaKnown RBP11.17□□□□□ -0.62
DDX41-218ENST00000625286 FMO1Q01740 532 aa11.17□□□□□ -0.62
DDX41-218ENST00000625286 PPARDQ03181 441 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms