RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 C19orf43Q9BQ61 176 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 SLCO1B3Q9NPD5 702 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 ASAH2Q9NR71 780 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 GKN1Q9NS71 199 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 TXLNGQ9NUQ3 528 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 KCNK4Q9NYG8 393 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 HACD3Q9P035 362 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 SERPINE1P05121 402 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 C8AP07357 584 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 STMN1P16949 149 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 BGNP21810 368 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 GABRR2P28476 465 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 CA8P35219 290 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 SLC26A3P40879 764 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 MAXP61244 160 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 USP10Q14694 798 aaKnown RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 CHI3L2Q15782 390 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 CNGA3Q16281 694 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 MPPE1Q53F39 396 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 FASTKD1Q53R41 847 aaKnown RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 PDE12Q6L8Q7 609 aaKnown RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 ESRP1Q6NXG1 681 aaKnown RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 CLEC14AQ86T13 490 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 WDR75Q8IWA0 830 aaKnown RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 PGBD5Q8N414 524 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.5■□□□□ 0.23
LDB3-208ENST00000623007 DCAF4L2Q8NA75 395 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 KLHL23Q8NBE8 558 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 KREMEN2Q8NCW0 462 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 C10orf82Q8WW14 230 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 ZFRQ96KR1 1074 aaKnown RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 C2orf49Q9BVC5 232 aaPredicted RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 SCUBE2Q9NQ36 999 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 COPG2Q9UBF2 871 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 FBXO5Q9UKT4 447 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 VPS9D1Q9Y2B5 631 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 CPQQ9Y646 472 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 A0A0D9SEW6 157 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 SNNO75324 88 aaPredicted RBP16.49■□□□□ 0.23
LDB3-208ENST00000623007 PROCP04070 461 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 CYBBP04839 570 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 C2P06681 752 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 ATXN1LP0C7T5 689 aaKnown RBP16.49■□□□□ 0.23
LDB3-208ENST00000623007 BMPR1AP36894 532 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 SCTRP47872 440 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 LEPRP48357 1165 aaKnown RBP16.49■□□□□ 0.23
LDB3-208ENST00000623007 CSRP3P50461 194 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 RAB10P61026 200 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 SLC20A2Q08357 652 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 MSLNQ13421 630 aaPredicted RBP16.49■□□□□ 0.23
LDB3-208ENST00000623007 CDH18Q13634 790 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 GALNTL6Q49A17 601 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 RNF219Q5W0B1 726 aaPredicted RBP16.49■□□□□ 0.23
LDB3-208ENST00000623007 MRNIPQ6NTE8 343 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 RETSATQ6NUM9 610 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 RAPH1Q70E73 1250 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 KIRREL3Q8IZU9 778 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 SLC25A41Q8N5S1 370 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 OR7D4Q8NG98 312 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 GPR150Q8NGU9 434 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 HERVK_113Q902F9 699 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 ACOT9Q9Y305 439 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 SLC4A7Q9Y6M7 1214 aa16.49■□□□□ 0.23
LDB3-208ENST00000623007 OBSL1O75147 1896 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 GFRA2O00451 464 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 TBL1XO60907 577 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 AHSGP02765 367 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 RB1P06400 928 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 CKMP06732 381 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 IRF1P10914 325 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 CPA3P15088 417 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 CR2P20023 1033 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 OGNP20774 298 aaKnown RBP16.48■□□□□ 0.23
LDB3-208ENST00000623007 ARFIP2P53365 341 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 BNIP1Q12981 228 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 ARHGAP15Q53QZ3 475 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 PPM1LQ5SGD2 360 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 ZNF470Q6ECI4 717 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 ARL14EPQ8N8R7 260 aaPredicted RBP16.48■□□□□ 0.23
LDB3-208ENST00000623007 TCF25Q9BQ70 676 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 WWP1Q9H0M0 922 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 NMRAL1Q9HBL8 299 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 ZNF334Q9HCZ1 680 aaPredicted RBP16.48■□□□□ 0.23
LDB3-208ENST00000623007 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.48■□□□□ 0.23
LDB3-208ENST00000623007 SLC39A10Q9ULF5 831 aa16.48■□□□□ 0.23
LDB3-208ENST00000623007 TMEM114B3SHH9 223 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 CBX4O00257 560 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 DNAJC6O75061 913 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 POU2F2P09086 479 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 LINC00271P0C7V0 271 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 AP1S1P61966 158 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 OCRLQ01968 901 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 BST1Q10588 318 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 CXorf57Q6NSI4 855 aaKnown RBP16.47■□□□□ 0.23
LDB3-208ENST00000623007 TMCO2Q7Z6W1 182 aaPredicted RBP16.47■□□□□ 0.23
LDB3-208ENST00000623007 SDCCAG8Q86SQ7 713 aaPredicted RBP16.47■□□□□ 0.23
LDB3-208ENST00000623007 TMC8Q8IU68 726 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 KIAA1958Q8N8K9 716 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 MRPL43Q8N983 215 aaKnown RBP16.47■□□□□ 0.23
LDB3-208ENST00000623007 AUTS2Q8WXX7 1259 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms