RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MID2Q9UJV3 735 aa15.92■□□□□ 0.14
NPHP4-211ENST00000622020 UBQLN1Q9UMX0 589 aaKnown RBP15.92■□□□□ 0.14
NPHP4-211ENST00000622020 MEIS3P2A8K0S8 358 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 TARM1B6A8C7 271 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 ZSCAN9O15535 394 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 MT-ND1P03886 318 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 DLG3Q92796 817 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 MRPL46Q9H2W6 279 aaKnown RBP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 FAF1Q9UNN5 650 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 HEATR9A2RTY3 570 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 MYBPHLA2RUH7 354 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 PPP6CO00743 305 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 MRASO14807 208 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 H6PDO95479 791 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 PENKP01210 267 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 APOA4P06727 396 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 HNRNPCP07910 306 aaKnown RBP eCLIP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 CHRM3P20309 590 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 NPY2RP49146 381 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 CAPRIN1Q14444 709 aaKnown RBP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 KYAT1Q16773 422 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 FAM83EQ2M2I3 478 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 PAN2Q504Q3 1202 aaKnown RBP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 NAPEPLDQ6IQ20 393 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 CLVS1Q8IUQ0 354 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 ARRDC4Q8NCT1 418 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 TTC16Q8NEE8 873 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 RMND5BQ96G75 393 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 COLEC11Q9BWP8 271 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 SOX17Q9H6I2 414 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-211ENST00000622020 OLAHQ9NV23 265 aa15.91■□□□□ 0.14
NPHP4-211ENST00000622020 PIRO00625 290 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 SUPT7LO94864 414 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 ARNTP27540 789 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 AFF1P51825 1210 aaKnown RBP15.9■□□□□ 0.14
NPHP4-211ENST00000622020 MAP7D1Q3KQU3 841 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 DUS1LQ6P1R4 473 aaKnown RBP15.9■□□□□ 0.14
NPHP4-211ENST00000622020 KLC3Q6P597 504 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 CHST15Q7LFX5 561 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-211ENST00000622020 SH3RF2Q8TEC5 729 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 DDI1Q8WTU0 396 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 PIF1Q9H611 641 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 CNOT6Q9ULM6 557 aaKnown RBP15.9■□□□□ 0.14
NPHP4-211ENST00000622020 DNAJC25-GNG10A0A024R161 153 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 CCDC166P0CW27 439 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 TPP2P29144 1249 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-211ENST00000622020 LRPAP1P30533 357 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 SH3BGRP55822 239 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-211ENST00000622020 RPL26P61254 145 aaKnown RBP15.9■□□□□ 0.14
NPHP4-211ENST00000622020 DCTN2Q13561 401 aaKnown RBP15.9■□□□□ 0.14
NPHP4-211ENST00000622020 KIF19Q2TAC6 998 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 NOTUMQ6P988 496 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 CUZD1Q86UP6 607 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 SPPL2CQ8IUH8 684 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 SLC2A11Q9BYW1 496 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 NDFIP2Q9NV92 336 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 DSEQ9UL01 958 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 MYRFQ9Y2G1 1151 aa15.9■□□□□ 0.14
NPHP4-211ENST00000622020 MAGEB16A2A368 324 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 SLC4A1P02730 911 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 ENTPD1P49961 510 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 CCNA1P78396 465 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 RHDQ02161 417 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 C16orf72Q14CZ0 275 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 DCAF4L1Q3SXM0 396 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 TAPT1Q6NXT6 567 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 PKN3Q6P5Z2 889 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 CHSY3Q70JA7 882 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 IFNLR1Q8IU57 520 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-211ENST00000622020 MIPOL1Q8TD10 442 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 DNAJB3Q8WWF6 145 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 OLFM1Q99784 485 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 FSD1LQ9BXM9 530 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 ZNF711Q9Y462 761 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 HTRA2O43464 458 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-211ENST00000622020 SUPT3HO75486 399 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 SLC25A27O95847 323 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 CES1P23141 567 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 EMP3P54852 163 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 LRP8Q14114 963 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 NOL9Q5SY16 702 aaKnown RBP15.89■□□□□ 0.13
NPHP4-211ENST00000622020 KLHL35Q6PF15 583 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 OFCC1Q8IZS5 231 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 CBR4Q8N4T8 237 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 NT5C3BQ969T7 300 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 TBL1YQ9BQ87 522 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 MCMBPQ9BTE3 642 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 SPAG4Q9NPE6 437 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 FBXW11Q9UKB1 542 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 CDC14AQ9UNH5 594 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 ANKRD6Q9Y2G4 727 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 TRPC5OSA6NMA1 111 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 FZD9O00144 591 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 NR5A2O00482 541 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 MOCS2O96007 188 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-211ENST00000622020 HSPA13P48723 471 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 STX5Q13190 355 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 ANKDD1AQ495B1 522 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 FAM35AQ86V20 835 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms