RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ST3GAL1Q11201 340 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 MYBPHQ13203 477 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 OS9Q13438 667 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-229ENST00000621897 DHX34Q14147 1143 aaKnown RBP4.54□□□□□ -1.68
BRCA1-229ENST00000621897 SF3B4Q15427 424 aaKnown RBP eCLIP4.54□□□□□ -1.68
BRCA1-229ENST00000621897 XKR9Q5GH70 373 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 ANKRD45Q5TZF3 282 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 MOB3CQ70IA8 216 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 PRSS45Q7RTY3 260 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 CCDC105Q8IYK2 499 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 NKAPQ8N5F7 415 aaKnown RBP4.54□□□□□ -1.68
BRCA1-229ENST00000621897 ZMIZ2Q8NF64 920 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 RFWD2Q8NHY2 731 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 RAB40AQ8WXH6 277 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 TRIB2Q92519 343 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 ADGRG7Q96K78 797 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 PKP4Q99569 1192 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 RETREG1Q9H6L5 497 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 MYH16Q9H6N6 1097 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 SPATS2LQ9NUQ6 558 aaKnown RBP4.54□□□□□ -1.68
BRCA1-229ENST00000621897 OR6C3Q9NZP0 311 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 IFT80Q9P2H3 777 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-229ENST00000621897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-229ENST00000621897 CBY3A6NI87 242 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 SH2D7A6NKC9 451 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-229ENST00000621897 IRAK2O43187 625 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 CEP104O60308 925 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 LDB3O75112 727 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 CAMTA2O94983 1202 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 VNN2O95498 520 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 SNRNP70P08621 437 aaKnown RBP4.53□□□□□ -1.68
BRCA1-229ENST00000621897 SRD5A1P18405 259 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 MT3P25713 68 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 SSTR2P30874 369 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 FMO4P31512 558 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 RYKP34925 604 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 LIFRP42702 1097 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 BIRC2Q13490 618 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 ZNF718Q3SXZ3 478 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 C9orf50Q5SZB4 431 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 RHBDF2Q6PJF5 856 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 IL20RBQ6UXL0 311 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 CCDC129Q6ZRS4 1044 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 LURAP1LQ8IV03 231 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 EXOC8Q8IYI6 725 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 CNOT9Q92600 299 aaKnown RBP4.53□□□□□ -1.68
BRCA1-229ENST00000621897 STAMQ92783 540 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 SCMH1Q96GD3 660 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 IGSF21Q96ID5 467 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 TWNKQ96RR1 684 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 VPS33BQ9H267 617 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 NOD2Q9HC29 1040 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 TXLNGQ9NUQ3 528 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 ANKRD10Q9NXR5 420 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 NDRG3Q9UGV2 375 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 PCDHGB3Q9Y5G1 929 aa4.53□□□□□ -1.68
BRCA1-229ENST00000621897 IGLV5-37A0A075B6J1 123 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 PABPN1LA6NDY0 278 aaKnown RBP4.52□□□□□ -1.69
BRCA1-229ENST00000621897 EBAG9O00559 213 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 KRT86O43790 486 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 ATP2C2O75185 946 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 IGKV3-20P01619 116 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 TFPIP10646 304 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 PIGAP37287 484 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 DLX5P56178 289 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 ARL4CP56559 192 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 ILF3Q12906 894 aaKnown RBP eCLIP4.52□□□□□ -1.69
BRCA1-229ENST00000621897 SNTA1Q13424 505 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 KRT81Q14533 505 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 DCAF6Q58WW2 860 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 FAM69BQ5VUD6 431 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 C17orf99Q6UX52 265 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 ZNF329Q86UD4 541 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 SFTPA2Q8IWL1 248 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 CPXM2Q8N436 756 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 DUX5Q96PT3 197 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 EPHX3Q9H6B9 360 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 MALT1Q9UDY8 824 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 SUFUQ9UMX1 484 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 COMMD10Q9Y6G5 202 aa4.52□□□□□ -1.69
BRCA1-229ENST00000621897 C17orf113A0A1B0GUU1 675 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 HSPB2A8KAH6 182 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 TPD52L2O43399 206 aaKnown RBP4.51□□□□□ -1.69
BRCA1-229ENST00000621897 PIP5K1CO60331 668 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 RGS11O94810 467 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 DAOP14920 347 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 PAPOLAP51003 745 aaKnown RBP4.51□□□□□ -1.69
BRCA1-229ENST00000621897 POU5F1BQ06416 359 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 DLG1Q12959 904 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 NAA25Q14CX7 972 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 ANKRD1Q15327 319 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 HSPB2Q16082 182 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 ZNF672Q499Z4 452 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-229ENST00000621897 ESCO2Q56NI9 601 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 FBXO47Q5MNV8 452 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 LSM14AQ8ND56 463 aaKnown RBP4.51□□□□□ -1.69
BRCA1-229ENST00000621897 SPATA20Q8TB22 786 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 SH3KBP1Q96B97 665 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 PHF7Q9BWX1 381 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-229ENST00000621897 MDFICQ9P1T7 246 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms