RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 TTC7BQ86TV6 843 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 ARHGAP18Q8N392 663 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 RFWD2Q8NHY2 731 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 SLC44A1Q8WWI5 657 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 TSPAN18Q96SJ8 248 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 NCAPGQ9BPX3 1015 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 C20orf27Q9GZN8 174 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 STMN4Q9H169 189 aaPredicted RBP10.63□□□□□ -0.71
VPS11-208ENST00000621676 LRRC40Q9H9A6 602 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 IL21Q9HBE4 155 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 VPS51Q9UID3 782 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 PHTF1Q9UMS5 762 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 PCDHA11Q9Y5I1 949 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 TNRC18O15417 2968 aaPredicted RBP10.63□□□□□ -0.71
VPS11-208ENST00000621676 ZMPSTE24O75844 475 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 KRT38O76015 456 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 F11P03951 625 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 SERPINF2P08697 491 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 HOXC13P31276 330 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 XRCC4Q13426 336 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 LRRC8BQ6P9F7 803 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 TSPAN33Q86UF1 283 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 SHKBP1Q8TBC3 707 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 KLK6Q92876 244 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 SLC45A3Q96JT2 553 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 GPR63Q9BZJ6 419 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 CLIC5Q9NZA1 410 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 OTOL1A6NHN0 477 aaPredicted RBP10.63□□□□□ -0.71
VPS11-208ENST00000621676 ERI2A8K979 691 aaKnown RBP10.63□□□□□ -0.71
VPS11-208ENST00000621676 C9JVG2 144 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 HNRNPLP14866 589 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS11-208ENST00000621676 GABRB3P28472 473 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 SLC1A2P43004 574 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 MAGEA11P43364 429 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 NME5P56597 212 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 SERINC3Q13530 473 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 PDE1CQ14123 709 aaPredicted RBP10.63□□□□□ -0.71
VPS11-208ENST00000621676 NXNQ6DKJ4 435 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 SCIMPQ6UWF3 145 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 TBC1D1Q86TI0 1168 aaPredicted RBP10.63□□□□□ -0.71
VPS11-208ENST00000621676 CHST14Q8NCH0 376 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 CFAP61Q8NHU2 1237 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 VPS39Q96JC1 886 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 FAM129AQ9BZQ8 928 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 RRN3Q9NYV6 651 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS11-208ENST00000621676 LSM7Q9UK45 103 aaKnown RBP10.63□□□□□ -0.71
VPS11-208ENST00000621676 TLK1Q9UKI8 766 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 RAI2Q9Y5P3 530 aa10.63□□□□□ -0.71
VPS11-208ENST00000621676 GPR179Q6PRD1 2367 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 ATP6AP2A0A1C7CYW4 349 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 LRRC14BA6NHZ5 514 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 ITM2AO43736 263 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 ATP6AP2O75787 350 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 CBX6O95503 412 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 HLA-FP30511 346 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 CDK18Q07002 472 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 DLX2Q07687 328 aaPredicted RBP10.62□□□□□ -0.71
VPS11-208ENST00000621676 SCAPQ12770 1279 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 RABGAP1LQ5R372 815 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 FBXW10Q5XX13 1052 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 NEPROQ6NW34 567 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 CEP97Q8IW35 865 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 ZNF75CPQ92670 426 aaPredicted RBP10.62□□□□□ -0.71
VPS11-208ENST00000621676 NXNL1Q96CM4 212 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 FEM1AQ9BSK4 669 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 EMILIN2Q9BXX0 1053 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 ROPN1BQ9BZX4 212 aaPredicted RBP10.62□□□□□ -0.71
VPS11-208ENST00000621676 ZBP1Q9H171 429 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 ROPN1Q9HAT0 212 aaPredicted RBP10.62□□□□□ -0.71
VPS11-208ENST00000621676 PNPLA8Q9NP80 782 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 SNX15Q9NRS6 342 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 CAPN7Q9Y6W3 813 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 EP300Q09472 2414 aaPredicted RBP10.62□□□□□ -0.71
VPS11-208ENST00000621676 HACD1B0YJ81 288 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 KIAA0355O15063 1070 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 C2P06681 752 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 CCNCP24863 283 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 ATP5DP30049 168 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 SERPINH1P50454 418 aaKnown RBP10.62□□□□□ -0.71
VPS11-208ENST00000621676 SEC13P55735 322 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 ARF5P84085 180 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 LMAN2Q12907 356 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 TTC39BQ5VTQ0 682 aaPredicted RBP10.62□□□□□ -0.71
VPS11-208ENST00000621676 GLT6D1Q7Z4J2 308 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 VSIG1Q86XK7 387 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 C10orf107Q8IVU9 208 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 PPHLN1Q8NEY8 458 aaKnown RBP10.62□□□□□ -0.71
VPS11-208ENST00000621676 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.62□□□□□ -0.71
VPS11-208ENST00000621676 RUBCNQ92622 972 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 PGAP3Q96FM1 320 aaPredicted RBP10.62□□□□□ -0.71
VPS11-208ENST00000621676 KXD1Q9BQD3 176 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 POLR1EQ9GZS1 481 aaKnown RBP10.62□□□□□ -0.71
VPS11-208ENST00000621676 FKBPLQ9UIM3 349 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 ITM2BQ9Y287 266 aa10.62□□□□□ -0.71
VPS11-208ENST00000621676 ZCWPW2A0A1B0GU75 182 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 SKAP2O75563 359 aaPredicted RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 TRIM16O95361 564 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 CLDN7O95471 211 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 PGAM1P18669 254 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms