RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PDE1CQ14123 709 aaPredicted RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 ADGRE1Q14246 886 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 TOMM20Q15388 145 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 C6orf52Q5T4I8 152 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 FBXO46Q6PJ61 603 aaPredicted RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 TIFABQ6ZNK6 161 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM183BPQ6ZVS7 135 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 SIX6OS1Q8N1H7 587 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 TMEM86AQ8N2M4 240 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 PHTF2Q8N3S3 785 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 MARVELD2Q8N4S9 558 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 RP9Q8TA86 221 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 THAP11Q96EK4 314 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 PAWRQ96IZ0 340 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 TBC1D23Q9NUY8 699 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 UBP1Q9NZI7 540 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 RSL24D1Q9UHA3 163 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 AP4E1Q9UPM8 1137 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 NME7Q9Y5B8 376 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 SNX13Q9Y5W8 968 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 MYBPHLA2RUH7 354 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 SLCO1B7G3V0H7 640 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 ERVK-10P10266 1014 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 FGF3P11487 239 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 MSX2P35548 267 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 CPOXP36551 454 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 KPNA2P52292 529 aaKnown RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 MTTPP55157 894 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 NUP107P57740 925 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 STX1BP61266 288 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TSPY1Q01534 308 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 NRF1Q16656 503 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 GEN1Q17RS7 908 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TBC1D25Q3MII6 688 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 SH3PXD2AQ5TCZ1 1133 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 OVOS1Q6IE37 1185 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 LRRC8EQ6NSJ5 796 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TRAF7Q6Q0C0 670 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TRIM67Q6ZTA4 783 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 GPR141Q7Z602 305 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 MPP5Q8N3R9 675 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 RCN3Q96D15 328 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 RMND5BQ96G75 393 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TMEM79Q9BSE2 394 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 LRRC40Q9H9A6 602 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 SNX15Q9NRS6 342 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TBC1D13Q9NVG8 400 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TMEM161AQ9NX61 479 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC39A10Q9ULF5 831 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 MYRFQ9Y2G1 1151 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 A0A0A0MRY4 1105 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TCRBV5S1A1TA0A578 114 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TBKBP1A7MCY6 615 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TMEM114B3SHH9 223 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 F8W810 466 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TNFRSF10BO14763 440 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 HDAC3O15379 428 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TIMM44O43615 452 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 METTL18O95568 372 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 ALDH2P05091 517 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 MPOP05164 745 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 PPARGP37231 505 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 GATMP50440 423 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TLR1Q15399 786 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 PPM1JQ5JR12 505 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 ARHGAP17Q68EM7 881 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 CES3Q6UWW8 571 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 CMC1Q7Z7K0 106 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 ZNF598Q86UK7 904 aaKnown RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 PIGZQ86VD9 579 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 CROCCP3Q8IVE0 287 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 DSELQ8IZU8 1212 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 ARFGAP1Q8N6T3 406 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 AZIN2Q96A70 460 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 MCRS1Q96EZ8 462 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 SPATA13Q96N96 652 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 EPB41L1Q9H4G0 881 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 USP29Q9HBJ7 922 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 NMRAL1Q9HBL8 299 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 TMEM216Q9P0N5 145 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 HCN4Q9Y3Q4 1203 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 PCDHB12Q9Y5F1 795 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 RNF103-CHMP3A0A140T963 221 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 C2CD4BA6NLJ0 364 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 NT5C1B-RDH14C9J2C7 533 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 AKAP10O43572 662 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 DDHD2O94830 711 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 ITGB1P05556 798 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 MLNP12872 115 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 RABGGTBP53611 331 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 YWHAHQ04917 246 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 PRKAA1Q13131 559 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 MSLNQ13421 630 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 USP10Q14694 798 aaKnown RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 PCLAFQ15004 111 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 PDK1Q15118 436 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 CLLU1OSQ5K130 101 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 OGFRL1Q5TC84 451 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 GRAMD4Q6IC98 578 aa7.06□□□□□ -1.28
SRGAP3-213ENST00000618999 UGT2A3Q6UWM9 527 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms