RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	HOXC13	P31276	330 aa		11.31	□□□□□ -0.6
TP53-223	ENST00000618944	USP46	P62068	366 aa		11.31	□□□□□ -0.6
TP53-223	ENST00000618944	CRHR2	Q13324	411 aa		11.31	□□□□□ -0.6
TP53-223	ENST00000618944	DSC3	Q14574	896 aa		11.31	□□□□□ -0.6
TP53-223	ENST00000618944	TRIP10	Q15642	601 aa		11.31	□□□□□ -0.6
TP53-223	ENST00000618944	ALF	Q53S48	1182 aa		11.31	□□□□□ -0.6
TP53-223	ENST00000618944	TIGD7	Q6NT04	549 aa	Predicted RBP	11.31	□□□□□ -0.6
TP53-223	ENST00000618944	SCML4	Q8N228	414 aa		11.31	□□□□□ -0.6
TP53-223	ENST00000618944	PHF21B	Q96EK2	531 aa		11.31	□□□□□ -0.6
TP53-223	ENST00000618944	MRPL46	Q9H2W6	279 aa	Known RBP	11.31	□□□□□ -0.6
TP53-223	ENST00000618944	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.31	□□□□□ -0.6
TP53-223	ENST00000618944	OR51F1	A6NGY5	319 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	MANSC4	A6NHS7	340 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-223	ENST00000618944	CLGN	O14967	610 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	CYBA	P13498	195 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	CPB1	P15086	417 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	PPARG	P37231	505 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-223	ENST00000618944	OR1G1	P47890	313 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	ARPP19	P56211	112 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	DSC2	Q02487	901 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	EFEMP1	Q12805	493 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	IHH	Q14623	411 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	PSMD5	Q16401	504 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	CIR1	Q86X95	450 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-223	ENST00000618944	MIB1	Q86YT6	1006 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	TTC9B	Q8N6N2	239 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	KDM1B	Q8NB78	822 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	OR6P1	Q8NGX9	317 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	PSMG2	Q969U7	264 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	TUBGCP5	Q96RT8	1024 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	NPAS2	Q99743	824 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	PIDD1	Q9HB75	910 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	MTF2	Q9Y483	593 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-223	ENST00000618944	KCTD3	Q9Y597	815 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	TLL2	Q9Y6L7	1015 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	SMIM24	O75264	130 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	PEX11B	O96011	259 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	LYN	P07948	512 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	CCDC166	P0CW27	439 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	TSPAN8	P19075	237 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	TCN1	P20061	433 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-223	ENST00000618944	RAB27A	P51159	221 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	AQP4	P55087	323 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	MFSD14C	Q5VZR4	134 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	AFMID	Q63HM1	303 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	IL31	Q6EBC2	164 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	BEND5	Q7L4P6	421 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	KBTBD6	Q86V97	674 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	PDSS2	Q86YH6	399 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	RP9	Q8TA86	221 aa	Known RBP	11.3	□□□□□ -0.6
TP53-223	ENST00000618944	SH3RF2	Q8TEC5	729 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	MRPL57	Q9BQC6	102 aa	Known RBP	11.3	□□□□□ -0.6
TP53-223	ENST00000618944	KLHL4	Q9C0H6	718 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	ZFYVE28	Q9HCC9	887 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	TNFRSF12A	Q9NP84	129 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	IGSF5	Q9NSI5	407 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	GMIP	Q9P107	970 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	VTI1B	Q9UEU0	232 aa		11.3	□□□□□ -0.6
TP53-223	ENST00000618944	COPG1	Q9Y678	874 aa	Known RBP	11.3	□□□□□ -0.6
TP53-223	ENST00000618944		H3BNX3	289 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	RNASEH1	O60930	286 aa	Known RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	XRCC1	P18887	633 aa	Predicted RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	SERPINH1	P50454	418 aa	Known RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	THOP1	P52888	689 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	TBX4	P57082	545 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	ART3	Q13508	389 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	PTPRCAP	Q14761	206 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	GRAMD1B	Q3KR37	738 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	MARC1	Q5VT66	337 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	KDELC1	Q6UW63	502 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	SNX31	Q8N9S9	440 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	ATAD1	Q8NBU5	361 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	ANKRD49	Q8WVL7	239 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	JADE3	Q92613	823 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	TMA16	Q96EY4	203 aa	Known RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	CNDP1	Q96KN2	507 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	B3GALT6	Q96L58	329 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	SERPINB11	Q96P15	392 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	SLC25A51	Q9H1U9	297 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	TBC1D13	Q9NVG8	400 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	NCKIPSD	Q9NZQ3	722 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944		A0A087X1B8	175 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	MT-CO1	P00395	513 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	ATP5F1	P24539	256 aa	Predicted RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	CCND3	P30281	292 aa	Predicted RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	DPP6	P42658	865 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	FLT3LG	P49771	235 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	RENBP	P51606	427 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	ARSD	P51689	593 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	PRKAA2	P54646	552 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	MS4A2	Q01362	244 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	POU4F1	Q01851	419 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	MSLN	Q13421	630 aa	Predicted RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	MS4A13	Q5J8X5	152 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	RAP1GAP2	Q684P5	730 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	C16orf89	Q6UX73	402 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	ADGRG6	Q86SQ4	1221 aa		11.29	□□□□□ -0.6

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