RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SLC25A51Q9H1U9 297 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 ATP6AP2A0A1C7CYW4 349 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 TK2O00142 265 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZNF197O14709 1029 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 TYROBPO43914 113 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 ATP6AP2O75787 350 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 SEC24DO94855 1032 aaPredicted RBP13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 CDC25CP30307 473 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 MSLNQ13421 630 aaPredicted RBP13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 ARMC12Q5T9G4 340 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 HAPLN3Q96S86 360 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 CDH19Q9H159 772 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 HIPK3Q9H422 1215 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 FLRT1Q9NZU1 646 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 GNEQ9Y223 722 aaKnown RBP13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 TCAF1Q9Y4C2 921 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 ADAMTSL1Q8N6G6 1762 aa13.31□□□□□ -0.28
PPP4R3B-206ENST00000616407 C9IYK1 514 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 RASSF9O75901 435 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 BAIAP3O94812 1187 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 HOXB8P17481 243 aaPredicted RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 PTDSS1P48651 473 aaKnown RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 CXCR3P49682 368 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 CDH13P55290 713 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 SH3BGRP55822 239 aaPredicted RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 SLC20A2Q08357 652 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 HNRNPDQ14103 355 aaKnown RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 ARHGAP15Q53QZ3 475 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 FAM45BPQ6NSW5 357 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 PCDH20Q8N6Y1 951 aaKnown RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 RBM15BQ8NDT2 890 aaKnown RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 FAM45AQ8TCE6 357 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 TRIB2Q92519 343 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 ING2Q9H160 280 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 MBLAC1A4D2B0 266 aaPredicted RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 SYN3O14994 580 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 KATNA1O75449 491 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 TOP3BO95985 862 aaKnown RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 FGF1P05230 155 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 PFKMP08237 780 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 HLA-DPA1P20036 260 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 PRKCHP24723 683 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 HCAR3P49019 387 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 BCL2L1Q07817 233 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 TBATAQ96M53 351 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 GATA5Q9BWX5 397 aaPredicted RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 SEMA4BQ9NPR2 832 aaPredicted RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 SNX13Q9Y5W8 968 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 FAM189A1O60320 539 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 TBL1XO60907 577 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZNF7P17097 686 aaPredicted RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 TACR2P21452 398 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 HTR7P34969 479 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 KRT33BQ14525 404 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZNF460Q14592 562 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 RIPOR1Q6ZS17 1223 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 SERINC5Q86VE9 423 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 OR7D4Q8NG98 312 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 RDH11Q8TC12 318 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 CNDP1Q96KN2 507 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 PPP1R10Q96QC0 940 aaKnown RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 TMEM209Q96SK2 561 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 MLPHQ9BV36 600 aaPredicted RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 CIPCQ9C0C6 399 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 ARHGAP39Q9C0H5 1083 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 OSBPL2Q9H1P3 480 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 STN1Q9H668 368 aaKnown RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 AGO1Q9UL18 857 aaKnown RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 CD3EAPO15446 510 aaKnown RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 FKTNO75072 461 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 MYO1DO94832 1006 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 ME2P23368 584 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 SLC18A2Q05940 514 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 RIPK1Q13546 671 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 LPIN1Q14693 890 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 PABPC1LQ4VXU2 614 aaKnown RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 PRSS55Q6UWB4 352 aaPredicted RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 GPRIN1Q7Z2K8 1008 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 STAG3L4Q8TBR4 150 aa13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 FUBP3Q96I24 572 aaKnown RBP eCLIP13.3□□□□□ -0.28
PPP4R3B-206ENST00000616407 MOXD2PA6NHM9 499 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 MRASO14807 208 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 INHAP05111 366 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 YBEYP58557 167 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZBTB17Q13105 803 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 BIRC2Q13490 618 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 NFYCQ13952 458 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 PRKD1Q15139 912 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 ARL13AQ5H913 290 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 OR4L1Q8NH43 312 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 TRPC4APQ8TEL6 797 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 CLPTM1LQ96KA5 538 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZCWPW1Q9H0M4 648 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 PNPLA8Q9NP80 782 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 PCDHB9Q9Y5E1 797 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 PSMD12O00232 456 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 MGRN1O60291 552 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 SPATA31D3P0C874 917 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms