RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 DNAJC14Q6Y2X3 702 aaPredicted RBP12.66□□□□□ -0.38
CDH4-203ENST00000614565 SYDE1Q6ZW31 735 aaPredicted RBP12.66□□□□□ -0.38
CDH4-203ENST00000614565 UBE2J2Q8N2K1 259 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 UHRF1Q96T88 793 aaPredicted RBP12.66□□□□□ -0.38
CDH4-203ENST00000614565 PAIP2BQ9ULR5 123 aaKnown RBP12.66□□□□□ -0.38
CDH4-203ENST00000614565 ALG6Q9Y672 507 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 ZMYM2Q9UBW7 1377 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 FFAR3O14843 346 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 GPR42O15529 346 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 STX3Q13277 289 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 FGD2Q7Z6J4 655 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 KRT77Q7Z794 578 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 FAM228AQ86W67 206 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 PCDH12Q9NPG4 1184 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 TAS2R13Q9NYV9 303 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDH4-203ENST00000614565 GUCY1B2O75343 617 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 IQCF3P0C7M6 154 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 PRLRP16471 622 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 SLC11A1P49279 550 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 SERPINH1P50454 418 aaKnown RBP12.66□□□□□ -0.38
CDH4-203ENST00000614565 SCARA3Q6AZY7 606 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 TRIM69Q86WT6 500 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 PARP9Q8IXQ6 854 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 DEPDC7Q96QD5 511 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 CYP2S1Q96SQ9 504 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 HEPHQ9BQS7 1158 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 CDH19Q9H159 772 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 RBM7Q9Y580 266 aaKnown RBP12.66□□□□□ -0.38
CDH4-203ENST00000614565 PHF2O75151 1096 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 DLG2Q15700 870 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 UBXN11Q5T124 520 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 MSANTD2Q6P1R3 559 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 USP53Q70EK8 1073 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 ABRAQ8N0Z2 381 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 LNX2Q8N448 690 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 DTNBP1Q96EV8 351 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 KHNYNO15037 678 aaKnown RBP12.66□□□□□ -0.38
CDH4-203ENST00000614565 IL12BP29460 328 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 RRM2P31350 389 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 PDX1P52945 283 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 NLRP9Q7RTR0 991 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 CYP4Z1Q86W10 505 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 GDF3Q9NR23 364 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 TMCC3Q9ULS5 477 aa12.66□□□□□ -0.38
CDH4-203ENST00000614565 AKAP3O75969 853 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 IL33O95760 270 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 MYOGP15173 224 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 IRF8Q02556 426 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 BEND7Q8N7W2 519 aaPredicted RBP12.65□□□□□ -0.38
CDH4-203ENST00000614565 TXNDC5Q8NBS9 432 aaKnown RBP12.65□□□□□ -0.38
CDH4-203ENST00000614565 RADILQ96JH8 1075 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 NDC1Q9BTX1 674 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 NPHS2Q9NP85 383 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.65□□□□□ -0.38
CDH4-203ENST00000614565 HEPACAM2A8MVW5 462 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 ZNF862O60290 1169 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 RHOP08100 348 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 ARHGAP40Q5TG30 622 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 NPNTQ6UXI9 565 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 PPIL6Q8IXY8 311 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 LRRC1Q9BTT6 524 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 TDP1Q9NUW8 608 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 SNX10Q9Y5X0 201 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 RAD54BQ9Y620 910 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 AFDNP55196 1824 aaKnown RBP12.65□□□□□ -0.38
CDH4-203ENST00000614565 PMS1P54277 932 aaKnown RBP12.65□□□□□ -0.38
CDH4-203ENST00000614565 GUCY1A3Q02108 690 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 MTF1Q14872 753 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 SLC18A3Q16572 532 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 DEPDC1Q5TB30 811 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 SPATA21Q7Z572 469 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 GPSM1Q86YR5 675 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 CENPLQ8N0S6 344 aaPredicted RBP12.65□□□□□ -0.38
CDH4-203ENST00000614565 ZNF248Q8NDW4 579 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 OPTCQ9UBM4 332 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 DGKAP23743 735 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 PTPN9P43378 593 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 GSSP48637 474 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 MRPS5P82675 430 aaKnown RBP12.65□□□□□ -0.38
CDH4-203ENST00000614565 SMARCB1Q12824 385 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 CERCAMQ5T4B2 595 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 TTC23Q5W5X9 447 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 MRPL1Q9BYD6 325 aaKnown RBP12.65□□□□□ -0.38
CDH4-203ENST00000614565 FAM126AQ9BYI3 521 aaPredicted RBP12.65□□□□□ -0.38
CDH4-203ENST00000614565 SIT1Q9Y3P8 196 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 TBX18O95935 607 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 STX5Q13190 355 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 RNF43Q68DV7 783 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 SYT12Q8IV01 421 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 B3GNT5Q9BYG0 378 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 DPEP3Q9H4B8 488 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 SLC12A4Q9UP95 1085 aa12.65□□□□□ -0.38
CDH4-203ENST00000614565 CCNDBP1O95273 360 aa12.64□□□□□ -0.39
CDH4-203ENST00000614565 ITGB5P18084 799 aa12.64□□□□□ -0.39
CDH4-203ENST00000614565 TACR2P21452 398 aa12.64□□□□□ -0.39
CDH4-203ENST00000614565 RPL4P36578 427 aaKnown RBP12.64□□□□□ -0.39
CDH4-203ENST00000614565 CSKP41240 450 aa12.64□□□□□ -0.39
CDH4-203ENST00000614565 PCBP1Q15365 356 aaKnown RBP eCLIP12.64□□□□□ -0.39
CDH4-203ENST00000614565 C11orf63Q6NUN7 778 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms