RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 MYO1AQ9UBC5 1043 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 DKK4Q9UBT3 224 aa23.01■■□□□ 1.27
FAM228B-208ENST00000613899 BZW2Q9Y6E2 419 aaKnown RBP23.01■■□□□ 1.27
FAM228B-208ENST00000613899 SPTY2D1-AS1A0A0U1RR47 76 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 H3BM21 787 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 SIGLEC6O43699 453 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 LRCH4O75427 683 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 XPAP23025 273 aaPredicted RBP23■■□□□ 1.27
FAM228B-208ENST00000613899 ACP1P24666 158 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 SUOXP51687 545 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 ELP6Q0PNE2 266 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 CAMK2BQ13554 666 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 ACAP1Q15027 740 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 CYTH1Q15438 398 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 PPP6R3Q5H9R7 873 aaPredicted RBP23■■□□□ 1.27
FAM228B-208ENST00000613899 CYP4V2Q6ZWL3 525 aaPredicted RBP23■■□□□ 1.27
FAM228B-208ENST00000613899 PDCD7Q8N8D1 485 aaKnown RBP23■■□□□ 1.27
FAM228B-208ENST00000613899 NETO2Q8NC67 525 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 MDM1Q8TC05 714 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 CXorf40AQ8TE69 158 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 SYN2Q92777 582 aaPredicted RBP23■■□□□ 1.27
FAM228B-208ENST00000613899 UCKL1Q9NWZ5 548 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 FAM208BQ5VWN6 2430 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 KNTC1P50748 2209 aa23■■□□□ 1.27
FAM228B-208ENST00000613899 ACACAQ13085 2346 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 NEMP2A6NFY4 417 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 GOLGA6L19H0YKK7 550 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 TAF4O00268 1085 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 TRIM38O00635 465 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 TM7SF2O76062 418 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 NME1P15531 152 aaKnown RBP22.99■■□□□ 1.27
FAM228B-208ENST00000613899 ERCC2P18074 760 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 PTMSP20962 102 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 PCK1P35558 622 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 PBX1P40424 430 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 PAPOLAP51003 745 aaKnown RBP22.99■■□□□ 1.27
FAM228B-208ENST00000613899 UBASH3AP57075 661 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 DAB2P98082 770 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 PDE1CQ14123 709 aaPredicted RBP22.99■■□□□ 1.27
FAM228B-208ENST00000613899 FZD2Q14332 565 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 LRRC73Q5JTD7 316 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 MARCH9Q86YJ5 346 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 HCAR2Q8TDS4 363 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 SLC39A8Q9C0K1 460 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 ZWILCHQ9H900 591 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 NLGN3Q9NZ94 848 aa22.99■■□□□ 1.27
FAM228B-208ENST00000613899 IPO11Q9UI26 975 aaKnown RBP22.99■■□□□ 1.27
FAM228B-208ENST00000613899 TRABD2BA6NFA1 517 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 J3KR12 359 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 FFAR2O15552 330 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 PIGNO95427 931 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 CSF2P04141 144 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 JUPP14923 745 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 HCAR3P49019 387 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 CFAP58Q5T655 872 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 HES3Q5TGS1 186 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 HGSNATQ68CP4 663 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 TUBGCP5Q96RT8 1024 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.98■■□□□ 1.27
FAM228B-208ENST00000613899 DUSP23Q9BVJ7 150 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 SP110Q9HB58 689 aa22.98■■□□□ 1.27
FAM228B-208ENST00000613899 APC2O95996 2303 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 TSPAN11A1L157 253 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 INSIG1O15503 277 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 TIMP2P16035 220 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 PFN3P60673 137 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 PTK2BQ14289 1009 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 AFMIDQ63HM1 303 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 BRAT1Q6PJG6 821 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 LZTR1Q8N653 840 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 CENPTQ96BT3 561 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 ZNF641Q96N77 438 aaPredicted RBP22.97■■□□□ 1.27
FAM228B-208ENST00000613899 SUV39H2Q9H5I1 410 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 EVA1BQ9NVM1 165 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 ANKRD36A6QL64 1941 aa22.97■■□□□ 1.27
FAM228B-208ENST00000613899 H3BRJ5 948 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 DFFAO00273 331 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 TOR1BO14657 336 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 SCAMP1O15126 338 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 MMP20O60882 483 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 PALMO75781 387 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 SERPING1P05155 500 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 IGFALSP35858 605 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 CSNK1DP48730 415 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 THOP1P52888 689 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 ZBED6P86452 979 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 DPYSQ14117 519 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 RFTN1Q14699 578 aaPredicted RBP22.96■■□□□ 1.27
FAM228B-208ENST00000613899 DPYSL2Q16555 572 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 ZNF542PQ5EBM4 170 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 ARHGAP12Q8IWW6 846 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 NPWQ8N729 165 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 ZNF548Q8NEK5 533 aaPredicted RBP22.96■■□□□ 1.27
FAM228B-208ENST00000613899 NXPE2Q96DL1 559 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 CINPQ9BW66 212 aaPredicted RBP22.96■■□□□ 1.27
FAM228B-208ENST00000613899 ATP13A3Q9H7F0 1226 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 USP29Q9HBJ7 922 aa22.96■■□□□ 1.27
FAM228B-208ENST00000613899 CWC15Q9P013 229 aaKnown RBP22.96■■□□□ 1.27
FAM228B-208ENST00000613899 GIMD1P0DJR0 217 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 SERPINA4P29622 427 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms