RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 KRT71Q3SY84 523 aa13.92□□□□□ -0.18
TMEM254-213ENST00000613758 DNAJC21Q5F1R6 531 aaKnown RBP13.92□□□□□ -0.18
TMEM254-213ENST00000613758 RANBP10Q6VN20 620 aa13.92□□□□□ -0.18
TMEM254-213ENST00000613758 NUDT18Q6ZVK8 323 aa13.92□□□□□ -0.18
TMEM254-213ENST00000613758 ZBED8Q8IZ13 594 aa13.92□□□□□ -0.18
TMEM254-213ENST00000613758 PCDH20Q8N6Y1 951 aaKnown RBP13.92□□□□□ -0.18
TMEM254-213ENST00000613758 OR2AP1Q8NGE2 309 aa13.92□□□□□ -0.18
TMEM254-213ENST00000613758 DNASE1L2Q92874 299 aa13.92□□□□□ -0.18
TMEM254-213ENST00000613758 MYO19Q96H55 970 aa13.92□□□□□ -0.18
TMEM254-213ENST00000613758 P2RY13Q9BPV8 354 aa13.92□□□□□ -0.18
TMEM254-213ENST00000613758 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
TMEM254-213ENST00000613758 EVLQ9UI08 416 aaPredicted RBP13.92□□□□□ -0.18
TMEM254-213ENST00000613758 SLC8A2Q9UPR5 921 aa13.92□□□□□ -0.18
TMEM254-213ENST00000613758 COL4A3Q01955 1670 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 TTC34A8MYJ7 566 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 SPECC1L-ADORA2AF8WAN1 911 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 AP1S1P61966 158 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 CDK18Q07002 472 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 CARD16Q5EG05 197 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 AGBL2Q5U5Z8 902 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 DENND5AQ6IQ26 1287 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 ANKMY2Q8IV38 441 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 RYBPQ8N488 228 aaPredicted RBP13.91□□□□□ -0.18
TMEM254-213ENST00000613758 OR6K2Q8NGY2 324 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 FRS2Q8WU20 508 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 UCMAQ8WVF2 138 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 IFT43Q96FT9 208 aa13.91□□□□□ -0.18
TMEM254-213ENST00000613758 LOC285095A0A1B0GVY8 99 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 SDR42E2A6NKP2 422 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 AP3B1O00203 1094 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 BNIP3LO60238 219 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 GSRP00390 522 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 CTHP32929 405 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 MAPK8P45983 427 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 CDH17Q12864 832 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 MYLK3Q32MK0 819 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 Q6ZVU0 165 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 AGGF1Q8N302 714 aaeCLIP13.9□□□□□ -0.18
TMEM254-213ENST00000613758 SLC25A41Q8N5S1 370 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 FEM1CQ96JP0 617 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 SIGLEC10Q96LC7 697 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 C8orf33Q9H7E9 229 aaPredicted RBP13.9□□□□□ -0.18
TMEM254-213ENST00000613758 HEBP1Q9NRV9 189 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 BFARQ9NZS9 450 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 PCDHGC4Q9Y5F7 938 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 RAI2Q9Y5P3 530 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 PIAS3Q9Y6X2 628 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 HMGB1P1B2RPK0 211 aaPredicted RBP13.9□□□□□ -0.18
TMEM254-213ENST00000613758 NARSO43776 548 aaKnown RBP13.9□□□□□ -0.18
TMEM254-213ENST00000613758 EPOP01588 193 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 TPH1P17752 444 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 MGAT1P26572 445 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 ELK3P41970 407 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 CHRNA4P43681 627 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 NPY2RP49146 381 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 GABPB1Q06547 395 aaPredicted RBP13.9□□□□□ -0.18
TMEM254-213ENST00000613758 TDGQ13569 410 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 FNDC3BQ53EP0 1204 aaKnown RBP13.9□□□□□ -0.18
TMEM254-213ENST00000613758 RALGPS2Q86X27 583 aaPredicted RBP13.9□□□□□ -0.18
TMEM254-213ENST00000613758 IGDCC3Q8IVU1 814 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 SUGP1Q8IWZ8 645 aaKnown RBP13.9□□□□□ -0.18
TMEM254-213ENST00000613758 PLPP6Q8IY26 295 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 MPP5Q8N3R9 675 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 KDM1BQ8NB78 822 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 FBXO36Q8NEA4 188 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 EPS8L3Q8TE67 593 aaKnown RBP13.9□□□□□ -0.18
TMEM254-213ENST00000613758 PYROXD1Q8WU10 500 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 LRRC39Q96DD0 335 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 ARNT2Q9HBZ2 717 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 CHKBQ9Y259 395 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 TEX264Q9Y6I9 313 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 TICRRQ7Z2Z1 1910 aa13.9□□□□□ -0.18
TMEM254-213ENST00000613758 XIRP2A4UGR9 3374 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.89□□□□□ -0.19
TMEM254-213ENST00000613758 GOLGA6L10A6NI86 522 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 POP4O95707 220 aaKnown RBP13.89□□□□□ -0.19
TMEM254-213ENST00000613758 ABHD2P08910 425 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 GKP32189 559 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 TNFRSF4P43489 277 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 RECQLP46063 649 aaPredicted RBP13.89□□□□□ -0.19
TMEM254-213ENST00000613758 PFKPQ01813 784 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 ZNF234Q14588 700 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 TERF2Q15554 542 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 SLC1A5Q15758 541 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 CCDC38Q502W7 563 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 CERCAMQ5T4B2 595 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 TXNDC11Q6PKC3 985 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 DPY19L3Q6ZPD9 716 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 TLCD1Q96CP7 247 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 TDRD1Q9BXT4 1180 aaKnown RBP13.89□□□□□ -0.19
TMEM254-213ENST00000613758 ROPN1BQ9BZX4 212 aaPredicted RBP13.89□□□□□ -0.19
TMEM254-213ENST00000613758 ROPN1Q9HAT0 212 aaPredicted RBP13.89□□□□□ -0.19
TMEM254-213ENST00000613758 CHMP2BQ9UQN3 213 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 ARIH1Q9Y4X5 557 aaPredicted RBP13.89□□□□□ -0.19
TMEM254-213ENST00000613758 MAD1L1Q9Y6D9 718 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.89□□□□□ -0.19
TMEM254-213ENST00000613758 MIA3Q5JRA6 1907 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 KIAA1549LQ6ZVL6 1849 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 CPP00450 1065 aa13.89□□□□□ -0.19
TMEM254-213ENST00000613758 PRLP01236 227 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms