RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ARHGEF2Q92974 986 aaKnown RBP23.76■■□□□ 1.39
MMP28-203ENST00000612672 RAB7BQ96AH8 199 aa23.76■■□□□ 1.39
MMP28-203ENST00000612672 ISG20Q96AZ6 181 aaKnown RBP23.76■■□□□ 1.39
MMP28-203ENST00000612672 TBATAQ96M53 351 aa23.76■■□□□ 1.39
MMP28-203ENST00000612672 HAPLN3Q96S86 360 aa23.76■■□□□ 1.39
MMP28-203ENST00000612672 DNAJC12Q9UKB3 198 aa23.76■■□□□ 1.39
MMP28-203ENST00000612672 D6RAR5 112 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 FAM72CH0Y354 149 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 KRIT1O00522 736 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 RIOK3O14730 519 aaKnown RBP23.75■■□□□ 1.39
MMP28-203ENST00000612672 TERTO14746 1132 aaKnown RBP23.75■■□□□ 1.39
MMP28-203ENST00000612672 F9P00740 461 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 ITGB6P18564 788 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 WT1P19544 449 aaPredicted RBP23.75■■□□□ 1.39
MMP28-203ENST00000612672 EIF4A3P38919 411 aaKnown RBP23.75■■□□□ 1.39
MMP28-203ENST00000612672 RPIAP49247 311 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 FAXCQ5TGI0 409 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 FAM72AQ5TYM5 149 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 FAM72DQ6L9T8 149 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 ZSCAN30Q86W11 494 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 NLRP14Q86W24 1093 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 FAM72BQ86X60 149 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 SDR16C5Q8N3Y7 309 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 FAM81BQ96LP2 452 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 EPAS1Q99814 870 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.75■■□□□ 1.39
MMP28-203ENST00000612672 GULP1Q9UBP9 304 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 TMEM59LQ9UK28 342 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 COQ6Q9Y2Z9 468 aa23.75■■□□□ 1.39
MMP28-203ENST00000612672 GOLGA8SH3BPF8 625 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 AGRPO00253 132 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 CSRP3P50461 194 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 IRF4Q15306 451 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 RAB11FIP2Q7L804 512 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 SFTPA2Q8IWL1 248 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 PLPP6Q8IY26 295 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 FAM71AQ8IYT1 594 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 FBXO39Q8N4B4 442 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 ARL10Q8N8L6 244 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 OR2AP1Q8NGE2 309 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 WDR48Q8TAF3 677 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 GLMNQ92990 594 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 TSACCQ96A04 125 aaPredicted RBP23.74■■□□□ 1.39
MMP28-203ENST00000612672 WRAP53Q9BUR4 548 aaKnown RBP23.74■■□□□ 1.39
MMP28-203ENST00000612672 SLC13A1Q9BZW2 595 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 PPARGC1AQ9UBK2 798 aaKnown RBP23.74■■□□□ 1.39
MMP28-203ENST00000612672 PCDHGA7Q9Y5G6 932 aa23.74■■□□□ 1.39
MMP28-203ENST00000612672 GSRP00390 522 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 SCNN1AP37088 669 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 YPEL5P62699 121 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 PTK2BQ14289 1009 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 ALG11Q2TAA5 492 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 KLHL40Q2TBA0 621 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 JAMLQ86YT9 394 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 CREBRFQ8IUR6 639 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 EMC1Q8N766 993 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 C18orf8Q96DM3 657 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 CPEB1Q9BZB8 566 aaKnown RBP23.73■■□□□ 1.39
MMP28-203ENST00000612672 STARD5Q9NSY2 213 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 IL17BQ9UHF5 180 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 DNAI1Q9UI46 699 aa23.73■■□□□ 1.39
MMP28-203ENST00000612672 GTPBP10A4D1E9 387 aaKnown RBP23.72■■□□□ 1.39
MMP28-203ENST00000612672 RPLP0P05388 317 aaKnown RBP23.72■■□□□ 1.39
MMP28-203ENST00000612672 ITIH1P19827 911 aa23.72■■□□□ 1.39
MMP28-203ENST00000612672 ETV5P41161 510 aa23.72■■□□□ 1.39
MMP28-203ENST00000612672 PPARDQ03181 441 aa23.72■■□□□ 1.39
MMP28-203ENST00000612672 MYLK3Q32MK0 819 aa23.72■■□□□ 1.39
MMP28-203ENST00000612672 TAF3Q5VWG9 929 aa23.72■■□□□ 1.39
MMP28-203ENST00000612672 ESRP1Q6NXG1 681 aaKnown RBP23.72■■□□□ 1.39
MMP28-203ENST00000612672 VASH2Q86V25 355 aa23.72■■□□□ 1.39
MMP28-203ENST00000612672 KLC2Q9H0B6 622 aa23.72■■□□□ 1.39
MMP28-203ENST00000612672 ACSL6Q9UKU0 697 aa23.72■■□□□ 1.39
MMP28-203ENST00000612672 PAXBP1Q9Y5B6 917 aa23.72■■□□□ 1.39
MMP28-203ENST00000612672 SDK2Q58EX2 2172 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 TM7SF2O76062 418 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 FAM87AP0C7U9 286 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 TIMP2P16035 220 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 HK3P52790 923 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 SNX16P57768 344 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 ATP11AP98196 1134 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 SRSF1Q07955 248 aaKnown RBP eCLIP23.71■■□□□ 1.39
MMP28-203ENST00000612672 GDPD4Q6W3E5 623 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 TMPRSS9Q7Z410 1059 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 HID1Q8IV36 788 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 TMEM35BQ8NCS4 154 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 SGF29Q96ES7 293 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 GFM1Q96RP9 751 aaKnown RBP23.71■■□□□ 1.39
MMP28-203ENST00000612672 FAM117AQ9C073 453 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 PISDQ9UG56 409 aa23.71■■□□□ 1.39
MMP28-203ENST00000612672 ARHGEF17Q96PE2 2063 aaPredicted RBP23.71■■□□□ 1.39
MMP28-203ENST00000612672 LRRK2Q5S007 2527 aa23.7■■□□□ 1.38
MMP28-203ENST00000612672 INSIG1O15503 277 aa23.7■■□□□ 1.38
MMP28-203ENST00000612672 GADD45BO75293 160 aaPredicted RBP23.7■■□□□ 1.38
MMP28-203ENST00000612672 CYP11B1P15538 503 aa23.7■■□□□ 1.38
MMP28-203ENST00000612672 INHBCP55103 352 aa23.7■■□□□ 1.38
MMP28-203ENST00000612672 C15orf59Q2T9L4 293 aaPredicted RBP23.7■■□□□ 1.38
MMP28-203ENST00000612672 USP53Q70EK8 1073 aa23.7■■□□□ 1.38
MMP28-203ENST00000612672 TTC7BQ86TV6 843 aa23.7■■□□□ 1.38
MMP28-203ENST00000612672 CXorf40AQ8TE69 158 aa23.7■■□□□ 1.38
MMP28-203ENST00000612672 HTR3CQ8WXA8 447 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms