RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 SEMA6AQ9H2E6 1030 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 MEAF6Q9HAF1 191 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 PREBQ9HCU5 417 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 TRPC7Q9HCX4 862 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 TMEM30AQ9NV96 361 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.22■□□□□ 0.35
EWSR1-221ENST00000610553 AAR2Q9Y312 384 aaKnown RBP17.22■□□□□ 0.35
EWSR1-221ENST00000610553 A0A087X1B8 175 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 TCRBV3S1A0A5B6 114 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 PRORSD1PA6NEY8 169 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 NEMP2A6NFY4 417 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 HNRNPRO43390 633 aaKnown RBP17.22■□□□□ 0.35
EWSR1-221ENST00000610553 CSPG5O95196 566 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 MT-CYBP00156 380 aaPredicted RBP17.22■□□□□ 0.35
EWSR1-221ENST00000610553 CDK4P11802 303 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 ARSAP15289 507 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 RANBP1P43487 201 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 C1QTNF8P60827 252 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 MAPRE2Q15555 327 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 RAB41Q5JT25 222 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 DENND5AQ6IQ26 1287 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 ZMIZ2Q8NF64 920 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 TSPAN14Q8NG11 270 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 USP33Q8TEY7 942 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 TMEM40Q8WWA1 233 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 IRGQQ8WZA9 623 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 SGF29Q96ES7 293 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 UHRF1Q96T88 793 aaPredicted RBP17.22■□□□□ 0.35
EWSR1-221ENST00000610553 SMOQ99835 787 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 TKTL2Q9H0I9 626 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 MRM3Q9HC36 420 aaKnown RBP17.22■□□□□ 0.35
EWSR1-221ENST00000610553 TNFRSF12AQ9NP84 129 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 SPAG4Q9NPE6 437 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 THEGQ9P2T0 379 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 TANC1Q9C0D5 1861 aa17.22■□□□□ 0.35
EWSR1-221ENST00000610553 ARHGEF37A1IGU5 675 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 HEATR9A2RTY3 570 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 H3BSA7 217 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 USP17L7P0C7H9 530 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 AXLP30530 894 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 CXCR3P49682 368 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 KPNA2P52292 529 aaKnown RBP17.21■□□□□ 0.35
EWSR1-221ENST00000610553 TRAP1Q12931 704 aaKnown RBP17.21■□□□□ 0.35
EWSR1-221ENST00000610553 RALGDSQ12967 914 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 PPIL2Q13356 520 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 UBXN11Q5T124 520 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 PM20D1Q6GTS8 502 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 KLC3Q6P597 504 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 BHLHA9Q7RTU4 235 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 CCDC117Q8IWD4 279 aaPredicted RBP17.21■□□□□ 0.35
EWSR1-221ENST00000610553 NUP93Q8N1F7 819 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 C2CD4AQ8NCU7 369 aaPredicted RBP17.21■□□□□ 0.35
EWSR1-221ENST00000610553 ELMO2Q96JJ3 720 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 FAR2Q96K12 515 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 HAUS8Q9BT25 410 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 WDCPQ9H6R7 721 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 IGSF5Q9NSI5 407 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 CD300AQ9UGN4 299 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 PLXNB2O15031 1838 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 COL4A4P53420 1690 aaPredicted RBP17.21■□□□□ 0.35
EWSR1-221ENST00000610553 RRN3P2A6NIE6 340 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 TRMUO75648 421 aaKnown RBP17.21■□□□□ 0.35
EWSR1-221ENST00000610553 CD151P48509 253 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 FASTKQ14296 549 aaKnown RBP17.21■□□□□ 0.35
EWSR1-221ENST00000610553 CYTH1Q15438 398 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 PSMD5Q16401 504 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 MTX3Q5HYI7 312 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 TECRLQ5HYJ1 363 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 C6orf10Q5SRN2 563 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 ARHGAP36Q6ZRI8 547 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 FAM35AQ86V20 835 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 ANKRD13AQ8IZ07 590 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 ARRDC4Q8NCT1 418 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 PPHLN1Q8NEY8 458 aaKnown RBP17.21■□□□□ 0.35
EWSR1-221ENST00000610553 IPMKQ8NFU5 416 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 PTCD2Q8WV60 388 aaKnown RBP17.21■□□□□ 0.35
EWSR1-221ENST00000610553 LPGAT1Q92604 370 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 FCRL5Q96RD9 977 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 TREX1Q9NSU2 369 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 GALNT8Q9NY28 637 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 RRN3Q9NYV6 651 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 SLC2A6Q9UGQ3 507 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 IPO11Q9UI26 975 aaKnown RBP17.21■□□□□ 0.35
EWSR1-221ENST00000610553 NEU3Q9UQ49 428 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 TCAF1Q9Y4C2 921 aa17.21■□□□□ 0.35
EWSR1-221ENST00000610553 PSMD12O00232 456 aaPredicted RBP17.2■□□□□ 0.34
EWSR1-221ENST00000610553 H6PDO95479 791 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 SNAI1O95863 264 aaPredicted RBP17.2■□□□□ 0.34
EWSR1-221ENST00000610553 F9P00740 461 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 SMPD1P17405 629 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 KCNA5P22460 613 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 LRPAP1P30533 357 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 SLC7A1P30825 629 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 ZNF470Q6ECI4 717 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 DCLRE1AQ6PJP8 1040 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 RIN3Q8TB24 985 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 GAB3Q8WWW8 586 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 FIS1Q9Y3D6 152 aa17.2■□□□□ 0.34
EWSR1-221ENST00000610553 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.2■□□□□ 0.34
EWSR1-221ENST00000610553 UBDO15205 165 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms