RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 NOL11Q9H8H0 719 aaKnown RBP22.57■■□□□ 1.2
SHANK2-220ENST00000608988 CCM2LQ9NUG4 571 aaPredicted RBP22.57■■□□□ 1.2
SHANK2-220ENST00000608988 TBC1D23Q9NUY8 699 aa22.57■■□□□ 1.2
SHANK2-220ENST00000608988 UBQLN1Q9UMX0 589 aaKnown RBP22.57■■□□□ 1.2
SHANK2-220ENST00000608988 AAR2Q9Y312 384 aaKnown RBP22.57■■□□□ 1.2
SHANK2-220ENST00000608988 MTF2Q9Y483 593 aaPredicted RBP22.57■■□□□ 1.2
SHANK2-220ENST00000608988 TSC2P49815 1807 aa22.57■■□□□ 1.2
SHANK2-220ENST00000608988 GPC4O75487 556 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 TXNP10599 105 aaKnown RBP22.56■■□□□ 1.2
SHANK2-220ENST00000608988 GABRB3P28472 473 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 TPP2P29144 1249 aaPredicted RBP22.56■■□□□ 1.2
SHANK2-220ENST00000608988 INPP5AQ14642 412 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 MAP7D1Q3KQU3 841 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 FBXO47Q5MNV8 452 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 TTC33Q6PID6 262 aaPredicted RBP22.56■■□□□ 1.2
SHANK2-220ENST00000608988 CNSTQ6PJW8 725 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 ZNF354CQ86Y25 554 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 FAM47BQ8NA70 645 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 NETO2Q8NC67 525 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 BORCS5Q969J3 196 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 MOCOSQ96EN8 888 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 SGF29Q96ES7 293 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 HSPBAP1Q96EW2 488 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 SLC45A3Q96JT2 553 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 CNDP2Q96KP4 475 aaKnown RBP22.56■■□□□ 1.2
SHANK2-220ENST00000608988 TUBGCP4Q9UGJ1 667 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 PDGFRBP09619 1106 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 SAT1P21673 171 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 AVPR1AP37288 418 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 GMPSP49915 693 aaPredicted RBP22.56■■□□□ 1.2
SHANK2-220ENST00000608988 PFKPQ01813 784 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 CLVS1Q8IUQ0 354 aaPredicted RBP22.56■■□□□ 1.2
SHANK2-220ENST00000608988 ZBTB8BQ8NAP8 495 aaPredicted RBP22.56■■□□□ 1.2
SHANK2-220ENST00000608988 PPWD1Q96BP3 646 aaKnown RBP22.56■■□□□ 1.2
SHANK2-220ENST00000608988 ZMAT2Q96NC0 199 aaKnown RBP22.56■■□□□ 1.2
SHANK2-220ENST00000608988 HOPXQ9BPY8 73 aaPredicted RBP22.56■■□□□ 1.2
SHANK2-220ENST00000608988 C9orf16Q9BUW7 83 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 PIGVQ9NUD9 493 aa22.56■■□□□ 1.2
SHANK2-220ENST00000608988 TMEM233B4DJY2 109 aa22.55■■□□□ 1.2
SHANK2-220ENST00000608988 PIRO00625 290 aa22.55■■□□□ 1.2
SHANK2-220ENST00000608988 PAMP19021 973 aa22.55■■□□□ 1.2
SHANK2-220ENST00000608988 MPP1Q00013 466 aa22.55■■□□□ 1.2
SHANK2-220ENST00000608988 BNIP2Q12982 314 aa22.55■■□□□ 1.2
SHANK2-220ENST00000608988 ARL13BQ3SXY8 428 aa22.55■■□□□ 1.2
SHANK2-220ENST00000608988 SLC22A9Q8IVM8 553 aa22.55■■□□□ 1.2
SHANK2-220ENST00000608988 TP53INP2Q8IXH6 220 aa22.55■■□□□ 1.2
SHANK2-220ENST00000608988 RNF168Q8IYW5 571 aaPredicted RBP22.55■■□□□ 1.2
SHANK2-220ENST00000608988 PGAP3Q96FM1 320 aaPredicted RBP22.55■■□□□ 1.2
SHANK2-220ENST00000608988 ACSS2Q9NR19 701 aa22.55■■□□□ 1.2
SHANK2-220ENST00000608988 VTNP04004 478 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 F7P08709 466 aaPredicted RBP22.54■■□□□ 1.2
SHANK2-220ENST00000608988 FAM163BP0C2L3 166 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 ZNF12P17014 697 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 CD151P48509 253 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 PITX1P78337 314 aaPredicted RBP22.54■■□□□ 1.2
SHANK2-220ENST00000608988 NME3Q13232 169 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 FAM83EQ2M2I3 478 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 KIAA0408Q6ZU52 694 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 ARMCX2Q7L311 632 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 SIX6OS1Q8N1H7 587 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 C2CD4AQ8NCU7 369 aaPredicted RBP22.54■■□□□ 1.2
SHANK2-220ENST00000608988 PPHLN1Q8NEY8 458 aaKnown RBP22.54■■□□□ 1.2
SHANK2-220ENST00000608988 ADAMTS10Q9H324 1103 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 MUC13Q9H3R2 512 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 PALMDQ9NP74 551 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 TMPRSS4Q9NRS4 437 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 TMEM9Q9P0T7 183 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 FBXW11Q9UKB1 542 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 DNAJC25-GNG10A0A024R161 153 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 TRIM64BA6NI03 449 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 SOCS2O14508 198 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 XPOTO43592 962 aaKnown RBP22.54■■□□□ 1.2
SHANK2-220ENST00000608988 COQ9O75208 318 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 LGALS2P05162 132 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 RBP1P09455 135 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 FCGR1AP12314 374 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 TPH1P17752 444 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 IL10P22301 178 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 FGFR3P22607 806 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 DCKP27707 260 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 LRPAP1P30533 357 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 SLC12A2P55011 1212 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 ATP6V0D1P61421 351 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 EN1Q05925 392 aaPredicted RBP22.54■■□□□ 1.2
SHANK2-220ENST00000608988 RALGDSQ12967 914 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 LAMC2Q13753 1193 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 TECRLQ5HYJ1 363 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 SLC27A1Q6PCB7 646 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 ALKAL1Q6UXT8 129 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 CEP97Q8IW35 865 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 APPL2Q8NEU8 664 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 GABPB2Q8TAK5 448 aaPredicted RBP22.54■■□□□ 1.2
SHANK2-220ENST00000608988 DPF3Q92784 378 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.54■■□□□ 1.22e-6■■■■■ 31.1
SHANK2-220ENST00000608988 C12orf43Q96C57 262 aaKnown RBP22.54■■□□□ 1.2
SHANK2-220ENST00000608988 FEM1CQ96JP0 617 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 OSBPL2Q9H1P3 480 aa22.54■■□□□ 1.2
SHANK2-220ENST00000608988 MAGED2Q9UNF1 606 aaPredicted RBP22.54■■□□□ 1.2
SHANK2-220ENST00000608988 ANXA9O76027 345 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 IDO1P14902 403 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms