RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 ZNF521Q96K83 1311 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 H0YGN5 161 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 ZC3H11AO75152 810 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 TOMM40O96008 361 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 LCATP04180 440 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 MAN1A1P33908 653 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 CPOXP36551 454 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 CDH12P55289 794 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 P2RX3P56373 397 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 DCAF7P61962 342 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 YWHAZP63104 245 aaKnown RBP4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 FAM27E3Q08E93 113 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 TWIST1Q15672 202 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 MAPRE1Q15691 268 aaKnown RBP4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 SOWAHAQ2M3V2 549 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 SGO1Q5FBB7 561 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 DCAF12L2Q5VW00 463 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 LRRC8EQ6NSJ5 796 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 ATF7IPQ6VMQ6 1270 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 DSTYKQ6XUX3 929 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 COLCA1Q6ZS62 124 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 TMTC3Q6ZXV5 915 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 ZNF367Q7RTV3 350 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 TBC1D26Q86UD7 250 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 LURAP1LQ8IV03 231 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 TMEM199Q8N511 208 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 ANKRD52Q8NB46 1076 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 UCMAQ8WVF2 138 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 KLHL29Q96CT2 875 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 RNF183Q96D59 192 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 PABPC5Q96DU9 382 aaKnown RBP4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 PIP5K1AQ99755 562 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 DDX4Q9NQI0 724 aaKnown RBP4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 OLA1Q9NTK5 396 aaKnown RBP4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 SPATS2LQ9NUQ6 558 aaKnown RBP4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 POT1Q9NUX5 634 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 ORC3Q9UBD5 711 aaPredicted RBP4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 INTS6Q9UL03 887 aaKnown RBP4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 PSAT1Q9Y617 370 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 SCINQ9Y6U3 715 aa4.08□□□□□ -1.76
RNU6-88P-201ENST00000606801 TAF1P21675 1872 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 TDRD9Q8NDG6 1382 aaKnown RBP4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 F5H0A9 414 aaPredicted RBP4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 LIASO43766 372 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 KIF1CO43896 1103 aaKnown RBP4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 CLEC3BP05452 202 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 ARSBP15848 533 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 ZNF8P17098 575 aaPredicted RBP4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 SHMT1P34896 483 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 COMPP49747 757 aaPredicted RBP4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 TMEM115Q12893 351 aaPredicted RBP4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 DCTN2Q13561 401 aaKnown RBP4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 MYBPC2Q14324 1141 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 KRT32Q14532 448 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 HNF4GQ14541 408 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 RALBP1Q15311 655 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 ALG11Q2TAA5 492 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 PRTGQ2VWP7 1150 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 ESCO2Q56NI9 601 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 PRAMEF19Q5SWL8 479 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 CCDC30Q5VVM6 783 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 SNX30Q5VWJ9 437 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 HAUS3Q68CZ6 603 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 HIST2H2BCQ6DN03 193 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 HIST2H2BDQ6DRA6 164 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 TRAPPC11Q7Z392 1133 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 SLC46A3Q7Z3Q1 461 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 DENND6AQ8IWF6 608 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 C7orf57Q8NEG2 295 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 CADM4Q8NFZ8 388 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 TMEM163Q8TC26 289 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 ADAMTS15Q8TE58 950 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 SLC35F5Q8WV83 523 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 SMG7Q92540 1137 aaKnown RBP4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 APOLD1Q96LR9 279 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 NLRP4Q96MN2 994 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 NUF2Q9BZD4 464 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 TKTL2Q9H0I9 626 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 CDT1Q9H211 546 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 SCPEP1Q9HB40 452 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 PLAC1Q9HBJ0 212 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 ANKRD10Q9NXR5 420 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 NCKIPSDQ9NZQ3 722 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 A4GNTQ9UNA3 340 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 LSM4Q9Y4Z0 139 aaKnown RBP4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 A3GALT2U3KPV4 340 aa4.07□□□□□ -1.76
RNU6-88P-201ENST00000606801 ITIH6Q6UXX5 1313 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 PGPEP1LA6NFU8 196 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 J3KR12 359 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 SNAP23O00161 211 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 CHL1O00533 1208 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 RGS14O43566 566 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 BAIAP3O94812 1187 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 SOX30O94993 753 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 TFP02787 698 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 MMP3P08254 477 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 TBXAS1P24557 533 aaPredicted RBP4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 PTGER1P34995 402 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 HDAC4P56524 1084 aa4.06□□□□□ -1.76
RNU6-88P-201ENST00000606801 KRTAP10-11P60412 298 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms