RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 TXNDC16Q9P2K2 825 aa21.79■■□□□ 1.08
USP6NL-204ENST00000606752 FCF1Q9Y324 198 aaKnown RBP21.79■■□□□ 1.08
USP6NL-204ENST00000606752 CCDC78A2IDD5 438 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 FAM47DPA6NHR8 397 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 TYRP14679 529 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 PAMP19021 973 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 HSP90AA5PQ58FG0 334 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 PITRM1Q5JRX3 1037 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 ESRP1Q6NXG1 681 aaKnown RBP21.78■■□□□ 1.08
USP6NL-204ENST00000606752 NPAS3Q8IXF0 933 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 LRRC3BQ96PB8 259 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 MARK1Q9P0L2 795 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 SLC17A6Q9P2U8 582 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 PSAT1Q9Y617 370 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 ATG2AQ2TAZ0 1938 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 TRANK1O15050 2925 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 TYROBPO43914 113 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 SPAG7O75391 227 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 PAPSS2O95340 614 aaPredicted RBP21.78■■□□□ 1.08
USP6NL-204ENST00000606752 ALADP13716 330 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 GP5P40197 560 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 CNGA3Q16281 694 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 NCEH1Q6PIU2 408 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 ANKRD42Q8N9B4 389 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 ATXN2LQ8WWM7 1075 aaKnown RBP21.78■■□□□ 1.08
USP6NL-204ENST00000606752 SERAC1Q96JX3 654 aa21.78■■□□□ 1.08
USP6NL-204ENST00000606752 TDRD1Q9BXT4 1180 aaKnown RBP21.78■■□□□ 1.08
USP6NL-204ENST00000606752 NSUN3Q9H649 340 aaKnown RBP21.78■■□□□ 1.08
USP6NL-204ENST00000606752 HMX2A2RU54 273 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 K7ERQ8 282 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 GLP2RO95838 553 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 ARCN1P48444 511 aaKnown RBP21.77■■□□□ 1.08
USP6NL-204ENST00000606752 HYAL1Q12794 435 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 DNAJC3Q13217 504 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 LAMB3Q13751 1172 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 SMAD1Q15797 465 aaKnown RBP21.77■■□□□ 1.08
USP6NL-204ENST00000606752 GRTP1Q5TC63 336 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 MROH9Q5TGP6 573 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 SH2D5Q6ZV89 423 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 NLRP9Q7RTR0 991 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 FGF13Q92913 245 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 AGAP2Q99490 1192 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 SLC2A6Q9UGQ3 507 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 CHKBQ9Y259 395 aa21.77■■□□□ 1.08
USP6NL-204ENST00000606752 MROH6A6NGR9 719 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 SRRM3A6NNA2 597 aaPredicted RBP21.76■■□□□ 1.07
USP6NL-204ENST00000606752 VAPBO95292 243 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 SLC18A2Q05940 514 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 BMPR2Q13873 1038 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 GALNT3Q14435 633 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 FAM78AQ5JUQ0 283 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 TSTD2Q5T7W7 516 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 ASTLQ6HA08 431 aaPredicted RBP21.76■■□□□ 1.07
USP6NL-204ENST00000606752 TIFABQ6ZNK6 161 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 EFHBQ8N7U6 833 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 BANPQ8N9N5 519 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 MGARPQ8TDB4 240 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 SGSM3Q96HU1 749 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 ASB16Q96NS5 453 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 KLF6Q99612 283 aaPredicted RBP21.76■■□□□ 1.07
USP6NL-204ENST00000606752 APOL5Q9BWW9 433 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 SLC2A11Q9BYW1 496 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 IARS2Q9NSE4 1012 aaKnown RBP21.76■■□□□ 1.07
USP6NL-204ENST00000606752 NSMCE4AQ9NXX6 385 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 PCDHGC4Q9Y5F7 938 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 RAI2Q9Y5P3 530 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 GOLGA8RI6L899 631 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 SMAD6O43541 496 aaKnown RBP21.76■■□□□ 1.07
USP6NL-204ENST00000606752 PRLP01236 227 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 CA4P22748 312 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 VIPR2P41587 438 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 TCEAL5Q5H9L2 206 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 KIAA0930Q6ICG6 404 aaPredicted RBP21.76■■□□□ 1.07
USP6NL-204ENST00000606752 SRLQ86TD4 932 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 BRSK1Q8TDC3 778 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 DENND1AQ8TEH3 1009 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 OSCP1Q8WVF1 389 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 SMARCD2Q92925 531 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 RSPRY1Q96DX4 576 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 DUS2Q9NX74 493 aaKnown RBP21.76■■□□□ 1.07
USP6NL-204ENST00000606752 GDE1Q9NZC3 331 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 GGA2Q9UJY4 613 aa21.76■■□□□ 1.07
USP6NL-204ENST00000606752 MYO9BQ13459 2157 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 CDH23Q9H251 3354 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 RFPL1O75677 317 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 PYGBP11216 843 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 PABPC1P11940 636 aaKnown RBP21.75■■□□□ 1.07
USP6NL-204ENST00000606752 ARNTP27540 789 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 AP1S1P61966 158 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 DMC1Q14565 340 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 LRRC14Q15048 493 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 FUT11Q495W5 492 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 ANKRD54Q6NXT1 300 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 SYCE2Q6PIF2 218 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 STRA8Q7Z7C7 330 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 ADGRE3Q9BY15 652 aa21.75■■□□□ 1.07
USP6NL-204ENST00000606752 LINC01565O15544 149 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 LDB2O43679 373 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 ITGA2BP08514 1039 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 RPA3P35244 121 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms