RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 TEX33O43247 280 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 AQP9O43315 295 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 BRINP1O60477 761 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 GCATO75600 419 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 TM7SF2O76062 418 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 IGSF6O95976 241 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 GP1BAP07359 652 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 FERP16591 822 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 NDST2P52849 883 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 RHOAP61586 193 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 PTK2BQ14289 1009 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 KLHL40Q2TBA0 621 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 PARP15Q460N3 678 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 TMEM52BQ4KMG9 183 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 LRRC73Q5JTD7 316 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 ZCCHC8Q6NZY4 707 aaKnown RBP7.71□□□□□ -1.18
CUX1-219ENST00000606749 VPS36Q86VN1 386 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 ARFGAP1Q8N6T3 406 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 TP53I13Q8NBR0 393 aaPredicted RBP7.71□□□□□ -1.18
CUX1-219ENST00000606749 SNIP1Q8TAD8 396 aaKnown RBP7.71□□□□□ -1.18
CUX1-219ENST00000606749 IFI44Q8TCB0 444 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 HCAR2Q8TDS4 363 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 LMX1AQ8TE12 382 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 BTN2A2Q8WVV5 523 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 EPAS1Q99814 870 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 SLC39A8Q9C0K1 460 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 ABCG4Q9H172 646 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 SUV39H2Q9H5I1 410 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 LRRC19Q9H756 370 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 RTN4Q9NQC3 1192 aaKnown RBP7.71□□□□□ -1.18
CUX1-219ENST00000606749 MBNL1Q9NR56 388 aaKnown RBP7.71□□□□□ -1.18
CUX1-219ENST00000606749 DONSONQ9NYP3 566 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 LHX3Q9UBR4 397 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 SALL4Q9UJQ4 1053 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 PNMA8BQ9ULN7 279 aaPredicted RBP7.71□□□□□ -1.18
CUX1-219ENST00000606749 MYO6Q9UM54 1294 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 RAI2Q9Y5P3 530 aa7.71□□□□□ -1.18
CUX1-219ENST00000606749 ANKRD11Q6UB99 2663 aaPredicted RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 CPED1A4D0V7 1026 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 EME2A4GXA9 379 aaPredicted RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 TMEM191CA6NGB0 347 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 TMCO5BA8MYB1 307 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 GOLGA6L22H0YM25 854 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 TOR1BO14657 336 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 FGF10O15520 208 aaPredicted RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 RRP8O43159 456 aaKnown RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 BUB1BO60566 1050 aaPredicted RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 PRAMEF11O60813 436 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 ABCB7O75027 752 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 PIGNO95427 931 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 FTLP02792 175 aaPredicted RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 DESP17661 470 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 TGM2P21980 687 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 PSMA2P25787 234 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 HTR7P34969 479 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 ACTN2P35609 894 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 IGFALSP35858 605 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 EIF4A3P38919 411 aaKnown RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 ABCG1P45844 678 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 PAPOLAP51003 745 aaKnown RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 SUOXP51687 545 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 THOP1P52888 689 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 TPI1P60174 286 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 YPEL5P62699 121 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 TYRO3Q06418 890 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 C1orf61Q13536 156 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 GRM3Q14832 879 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 CDKN3Q16667 212 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 CA9Q16790 459 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 UGP2Q16851 508 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 DEFB133Q30KQ1 61 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 TBC1D25Q3MII6 688 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 PRRT3Q5FWE3 981 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 CCDC183Q5T5S1 534 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 ERMARDQ5T6L9 678 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 FAXCQ5TGI0 409 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 PLEKHA7Q6IQ23 1121 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 GUSBP11Q6P575 273 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 LRRC69Q6ZNQ3 347 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 DNAAF5Q86Y56 855 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 RBFAQ8N0V3 343 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 AOPEPQ8N6M6 819 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 CXorf40AQ8TE69 158 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 CELF6Q96J87 481 aaKnown RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 EXOC2Q96KP1 924 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 ZNF641Q96N77 438 aaPredicted RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 BBC3Q96PG8 261 aaPredicted RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 DEPDC7Q96QD5 511 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 IL12RB2Q99665 862 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 WRAP53Q9BUR4 548 aaKnown RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 BOCQ9BWV1 1114 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 C1QTNF7Q9BXJ2 289 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 CLPBQ9H078 707 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 TCEAL2Q9H3H9 227 aaPredicted RBP7.7□□□□□ -1.18
CUX1-219ENST00000606749 PRORYQ9H606 182 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 PDFQ9HBH1 243 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 PARVAQ9NVD7 372 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 EVA1BQ9NVM1 165 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 GPATCH2LQ9NWQ4 482 aa7.7□□□□□ -1.18
CUX1-219ENST00000606749 AIPL1Q9NZN9 384 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms