RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ATP1A2P50993 1020 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PMS1P54277 932 aaKnown RBP11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 GCNT1Q02742 428 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 C16orf72Q14CZ0 275 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 IRF4Q15306 451 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 MAP9Q49MG5 647 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ZNF805Q5CZA5 627 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CERCAMQ5T4B2 595 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 OTUD1Q5VV17 481 aaPredicted RBP11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ANKRD40Q6AI12 368 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 KRBA2Q6ZNG9 492 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 NYAP1Q6ZVC0 841 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 GKN2Q86XP6 184 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TP53I13Q8NBR0 393 aaPredicted RBP11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 C9orf43Q8TAL5 461 aaPredicted RBP11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 LMO3Q8TAP4 145 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ARHGEF26Q96DR7 871 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 KREMEN1Q96MU8 473 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CPXM1Q96SM3 734 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 EPAS1Q99814 870 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 C1QTNF7Q9BXJ2 289 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TKTL2Q9H0I9 626 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SEMA6CQ9H3T2 930 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ACP6Q9NPH0 428 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PIGVQ9NUD9 493 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ASNSD1Q9NWL6 643 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 KCNK4Q9NYG8 393 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 APPL1Q9UKG1 709 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SPENQ96T58 3664 aaKnown RBP11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ILVBLA1L0T0 632 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TRIM49BA6NDI0 452 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 DRGXA6NNA5 263 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 KRIT1O00522 736 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TOR1BO14657 336 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 AREL1O15033 823 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 DAB1O75553 588 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TM7SF2O76062 418 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 UGT2B4P06133 528 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CCL4P13236 92 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 LIFP15018 202 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PRCPP42785 496 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ARF5P84085 180 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SLC20A2Q08357 652 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CETN1Q12798 172 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 EFHC1Q5JVL4 640 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 OLFML1Q6UWY5 402 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 LRRC31Q6UY01 552 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 FAM183BPQ6ZVS7 135 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SFTPA2Q8IWL1 248 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 IL22RA1Q8N6P7 574 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 GPR156Q8NFN8 814 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CXorf40AQ8TE69 158 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 NKD1Q969G9 470 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PMEPA1Q969W9 287 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PDXPQ96GD0 296 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 WRAP53Q9BUR4 548 aaKnown RBP11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 GTPBP4Q9BZE4 634 aaKnown RBP11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ARHGEF38Q9NXL2 777 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 AKAP7Q9P0M2 348 aaPredicted RBP11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 KLQ9UEF7 1012 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CNTN6Q9UQ52 1028 aa11.92□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ENO4A6NNW6 628 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 B4DGG1 531 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PMM2O15305 246 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 GLB1P16278 677 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TFE3P19532 575 aaPredicted RBP11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 HTR1BP28222 390 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 GNA15P30679 374 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SRP54P61011 504 aaKnown RBP11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PKP1Q13835 747 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 NFATC4Q14934 902 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 KIF26BQ2KJY2 2108 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 KLHL40Q2TBA0 621 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 BRMS1LQ5PSV4 323 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 KCTD16Q68DU8 428 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ENPP7Q6UWV6 458 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ZNF783Q6ZMS7 281 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 C11orf57Q6ZUT1 292 aaPredicted RBP11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TTC7BQ86TV6 843 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ATCAYQ86WG3 371 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PASD1Q8IV76 773 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ZNF606Q8WXB4 792 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 MIB2Q96AX9 1013 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 KLHL32Q96NJ5 620 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 B3GNT4Q9C0J1 378 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 WDCPQ9H6R7 721 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 RDH14Q9HBH5 336 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TMPRSS4Q9NRS4 437 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PLEKHB1Q9UF11 243 aaPredicted RBP11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 RP1P56715 2156 aa11.91□□□□□ -0.5
PDLIM1P1-201ENST00000604187 IGLV3-10A0A075B6K4 115 aa11.9□□□□□ -0.5
PDLIM1P1-201ENST00000604187 FAM237AA0A1B0GTK4 181 aa11.9□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TMEM110-MUSTN1A8MSY1 372 aa11.9□□□□□ -0.5
PDLIM1P1-201ENST00000604187 MTSS1O43312 755 aa11.9□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SRGAP2O75044 1071 aa11.9□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CD160O95971 181 aa11.9□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ITIH2P19823 946 aa11.9□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CXCR3P49682 368 aa11.9□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PEX5P50542 639 aa11.9□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ARSDP51689 593 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms