RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 DOCK4Q8N1I0 1966 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 CPED1A4D0V7 1026 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 ANKRD62A6NC57 917 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 PYCARD-AS1I3L0S3 204 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 BUB1O43683 1085 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 IGSF6O95976 241 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 CALB1P05937 261 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 UGT2B4P06133 528 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 HTR7P34969 479 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 STAT1P42224 750 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 ABL2P42684 1182 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 NSFP46459 744 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 CFHR1Q03591 330 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 EIF2B5Q13144 721 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 CDKN3Q16667 212 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 CDO1Q16878 200 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 PARP15Q460N3 678 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 C6orf132Q5T0Z8 1188 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 MACC1Q6ZN28 852 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 CATSPERBQ9H7T0 1116 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 ASCL3Q9NQ33 180 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 SAMSN1Q9NSI8 373 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 ADAM22Q9P0K1 906 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 APOBEC3BQ9UH17 382 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 SSUH2Q9Y2M2 353 aa18.05■□□□□ 0.48
SHKBP1-227ENST00000602011 SIGLEC16A6NMB1 481 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 CYSRT1A8MQ03 144 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 WASH4PA8MWX3 477 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 SPINT1O43278 529 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 GFPT2O94808 682 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 ALPIP09923 528 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 UNGP13051 313 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 XPAP23025 273 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 HTR1BP28222 390 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 FMO1Q01740 532 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 PPARDQ03181 441 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 ELOCQ15369 112 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 C15orf59Q2T9L4 293 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 PRRT3Q5FWE3 981 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 EFHC2Q5JST6 749 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 FAXCQ5TGI0 409 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 PHACTR4Q8IZ21 702 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 RTL3Q8N8U3 475 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 WDR36Q8NI36 951 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 FAM172AQ8WUF8 416 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 SELENOOQ9BVL4 669 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 SEMA4CQ9C0C4 833 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 NUP62CLQ9H1M0 184 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 NDFIP2Q9NV92 336 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 KLF15Q9UIH9 416 aa18.04■□□□□ 0.48
SHKBP1-227ENST00000602011 CFAP69A5D8W1 941 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 KRT10P13645 584 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 GPD1P21695 349 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 TGM2P21980 687 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 EPHB2P29323 1055 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 EIF4A3P38919 411 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 ADKP55263 362 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 HDAC4P56524 1084 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 JAM2P57087 298 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 POLR2FP61218 127 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 VAC14Q08AM6 782 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 EIF3IQ13347 325 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 SYCP1Q15431 976 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 DEFB133Q30KQ1 61 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 TMEM52BQ4KMG9 183 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 TAF1BQ53T94 588 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 HSP90AA4PQ58FG1 418 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 ARHGAP40Q5TG30 622 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 PPP1R2P3Q6NXS1 205 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 GUSBP11Q6P575 273 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 ZNF354CQ86Y25 554 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 PHF13Q86YI8 300 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 C3orf20Q8ND61 904 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 ANKRD20A12PQ8NF67 263 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 GPT2Q8TD30 523 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 ZNF641Q96N77 438 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 EPAS1Q99814 870 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 C11orf70Q9BRQ4 267 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 GANQ9H2C0 597 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 PADI4Q9UM07 663 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 DOLKQ9UPQ8 538 aa18.03■□□□□ 0.48
SHKBP1-227ENST00000602011 EIF3CLB5ME19 914 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 FAM72CH0Y354 149 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 YY2O15391 372 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 FGF10O15520 208 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 KLK10O43240 276 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 TMCC1O94876 653 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 CCDC172P0C7W6 258 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 TIMP2P16035 220 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 CHRNB2P17787 502 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 GKP32189 559 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 RFC1P35251 1148 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 RHOAP61586 193 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 SKOR1P84550 965 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 LRRC14Q15048 493 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 AGERQ15109 404 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 FAM72AQ5TYM5 149 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 FAM72DQ6L9T8 149 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 VPS36Q86VN1 386 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms