RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 FAF2Q96CS3 445 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 CAMK1GQ96NX5 476 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 CINPQ9BW66 212 aaPredicted RBP17.39■□□□□ 0.37
HERC3-214ENST00000601319 C1QTNF2Q9BXJ5 285 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 SLC17A9Q9BYT1 436 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 RBSNQ9H1K0 784 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 SEPT3Q9UH03 358 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 ANGPTL2Q9UKU9 493 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 WASF3Q9UPY6 502 aa17.39■□□□□ 0.37
HERC3-214ENST00000601319 SPAARA0A1B0GVQ0 90 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 SLC31A1O15431 190 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 INSIG1O15503 277 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 PEX11BO96011 259 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 HSPA9P38646 679 aaKnown RBP17.38■□□□□ 0.37
HERC3-214ENST00000601319 RGRP47804 291 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 RXRGP48443 463 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 ZNF75DP51815 510 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 TAS2R40P59535 323 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 AP1S1P61966 158 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 FGL2Q14314 439 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 LBRQ14739 615 aaKnown RBP17.38■□□□□ 0.37
HERC3-214ENST00000601319 SHBQ15464 509 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 TRIP6Q15654 476 aaKnown RBP17.38■□□□□ 0.37
HERC3-214ENST00000601319 BRAT1Q6PJG6 821 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 KYAT3Q6YP21 454 aaKnown RBP17.38■□□□□ 0.37
HERC3-214ENST00000601319 GCNT7Q6ZNI0 430 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 SPATS2Q86XZ4 545 aaKnown RBP17.38■□□□□ 0.37
HERC3-214ENST00000601319 CPNE8Q86YQ8 564 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 LRRC49Q8IUZ0 686 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 TP53INP2Q8IXH6 220 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 ATPAF2Q8N5M1 289 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 NETO2Q8NC67 525 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 SLC35G2Q8TBE7 412 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 SETD7Q8WTS6 366 aaKnown RBP17.38■□□□□ 0.37
HERC3-214ENST00000601319 SPOCK2Q92563 424 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 LENG8Q96PV6 779 aaPredicted RBP17.38■□□□□ 0.37
HERC3-214ENST00000601319 CDC6Q99741 560 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 ATP13A3Q9H7F0 1226 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 GPR27Q9NS67 375 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 ITM2BQ9Y287 266 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 LRP4O75096 1905 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 SPEGQ15772 3267 aa17.38■□□□□ 0.37
HERC3-214ENST00000601319 A6NNZ2 444 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 ZNF487B1APH4 448 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 NEMP1O14524 444 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 KCNK3O14649 394 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 MAFKO60675 156 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 TRIM16O95361 564 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 PIGNO95427 931 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 LCA5LO95447 670 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 CD48P09326 243 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 EPHA8P29322 1005 aaPredicted RBP17.37■□□□□ 0.37
HERC3-214ENST00000601319 SERPINA4P29622 427 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 RENBPP51606 427 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 FAM193AP78312 1265 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 ELP6Q0PNE2 266 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 PAFAH1B3Q15102 231 aaKnown RBP17.37■□□□□ 0.37
HERC3-214ENST00000601319 SRLQ86TD4 932 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 TTC7BQ86TV6 843 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 VSIG1Q86XK7 387 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 MAP7D3Q8IWC1 876 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 SAP25Q8TEE9 199 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 KLK6Q92876 244 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 ECHDC3Q96DC8 303 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 KLHDC7BQ96G42 594 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 KLF6Q99612 283 aaPredicted RBP17.37■□□□□ 0.37
HERC3-214ENST00000601319 CALN1Q9BXU9 219 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 SUV39H2Q9H5I1 410 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 FZD3Q9NPG1 666 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 GGT7Q9UJ14 662 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 PCDHB9Q9Y5E1 797 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 HS3ST3A1Q9Y663 406 aa17.37■□□□□ 0.37
HERC3-214ENST00000601319 MUSKO15146 869 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 MFSD11O43934 449 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 THEGLP0DJG4 465 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 TIMP2P16035 220 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 FECHP22830 423 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 HADHBP55084 474 aaKnown RBP17.36■□□□□ 0.37
HERC3-214ENST00000601319 SLC10A7Q0GE19 358 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 GALNT2Q10471 571 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 MMRN1Q13201 1228 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 ZNF235Q14590 738 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 MESDQ14696 234 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 ANKRD20A8PQ5CZ79 823 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 NCBP2-AS2Q69YL0 99 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 DCP2Q8IU60 420 aaKnown RBP17.36■□□□□ 0.37
HERC3-214ENST00000601319 CCDC170Q8IYT3 715 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 KCTD6Q8NC69 237 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 PCDH19Q8TAB3 1148 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 FATE1Q969F0 183 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 MYOCQ99972 504 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 MGME1Q9BQP7 344 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 CA5BQ9Y2D0 317 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 BTBD3Q9Y2F9 522 aa17.36■□□□□ 0.37
HERC3-214ENST00000601319 TDRD6O60522 2096 aaKnown RBP17.36■□□□□ 0.37
HERC3-214ENST00000601319 ARID1BQ8NFD5 2236 aaPredicted RBP17.36■□□□□ 0.37
HERC3-214ENST00000601319 TPRP12270 2363 aaKnown RBP17.35■□□□□ 0.37
HERC3-214ENST00000601319 IGLON5A6NGN9 336 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 BUB1BO60566 1050 aaPredicted RBP17.35■□□□□ 0.37
HERC3-214ENST00000601319 CR2P20023 1033 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms