RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 DNAJB1P25685 340 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 GK5Q6ZS86 529 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 CASP10Q92851 521 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 MAELQ96JY0 434 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 OLFM1Q99784 485 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 ACBD6Q9BR61 282 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 ENTPD7Q9NQZ7 604 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 IGSF5Q9NSI5 407 aa20.42■□□□□ 0.86
SHKBP1-225ENST00000600733 CYP2C18P33260 490 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 SLC12A2P55011 1212 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 SULT2A1Q06520 285 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 ADGRE1Q14246 886 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 RARS2Q5T160 578 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 MANEALQ5VSG8 457 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 NEPROQ6NW34 567 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 TAF2Q6P1X5 1199 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 RANBP10Q6VN20 620 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 PIWIL4Q7Z3Z4 852 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 KLHL32Q96NJ5 620 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 HAPLN3Q96S86 360 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 CLIC5Q9NZA1 410 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 MYADML2A6NDP7 307 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 KCNU1A8MYU2 1149 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 DNAJA2O60884 412 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 ETS2P15036 469 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 PAMP19021 973 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 POLD2P49005 469 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 PLK1P53350 603 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 KIAA0930Q6ICG6 404 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 ARHGAP18Q8N392 663 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 STON2Q8WXE9 905 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 CATSPERBQ9H7T0 1116 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 UBAP1Q9NZ09 502 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 TLL2Q9Y6L7 1015 aa20.41■□□□□ 0.86
SHKBP1-225ENST00000600733 BRCA2P51587 3418 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 A0A087X1B8 175 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 PGM3O95394 542 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 ATP5F1P24539 256 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 PMLP29590 882 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 HOXC13P31276 330 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 CCR1P32246 355 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 RPL9P32969 192 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 C14orf80Q86SX3 495 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 SATL1Q86VE3 508 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 CEP70Q8NHQ1 597 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 PTCD2Q8WV60 388 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 PKMYT1Q99640 499 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 TRPV2Q9Y5S1 764 aa20.4■□□□□ 0.86
SHKBP1-225ENST00000600733 TRPC5OSA6NMA1 111 aa20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 FGF10O15520 208 aaPredicted RBP20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 BCAS2O75934 225 aaPredicted RBP20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 CHRNA1P02708 482 aa20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 RPL26P61254 145 aaKnown RBP20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 POU4F1Q01851 419 aa20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 BTBD8Q5XKL5 378 aa20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 ZFP1Q6P2D0 407 aa20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 PELI3Q8N2H9 469 aa20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 LZTR1Q8N653 840 aa20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 PKP2Q99959 881 aa20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 MRM3Q9HC36 420 aaKnown RBP20.39■□□□□ 0.86
SHKBP1-225ENST00000600733 ACOT8O14734 319 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 PABPC4LP0CB38 370 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 SLC5A3P53794 718 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 WNT3AP56704 352 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 C1QTNF8P60827 252 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 SATB1Q01826 763 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 PTK2BQ14289 1009 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 RFTN1Q14699 578 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 C11orf91Q3C1V1 193 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 TECRLQ5HYJ1 363 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 BRMS1LQ5PSV4 323 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 METTL23Q86XA0 190 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 CCDC117Q8IWD4 279 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 MARVELD2Q8N4S9 558 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 PCDH20Q8N6Y1 951 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 HMGCLL1Q8TB92 370 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 AGO3Q9H9G7 860 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 ADA2Q9NZK5 511 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 GIT1Q9Y2X7 761 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 MIA3Q5JRA6 1907 aa20.39■□□□□ 0.85
SHKBP1-225ENST00000600733 F8W810 466 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 DENRO43583 198 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 CRTAMO95727 393 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 DNAJB13P59910 316 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 GK3PQ14409 553 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 PPP1R3AQ16821 1122 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 SPRYD7Q5W111 196 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 SPATA24Q86W54 205 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 SNX31Q8N9S9 440 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 SPPL2BQ8TCT7 592 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 ABCC13Q9NSE7 274 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 PTPRDP23468 1912 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 A8MT66 165 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 E9PAM4 449 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 OR6B1O95007 311 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 ITGB1P05556 798 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 SMIM18P0DKX4 95 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 HDCP19113 662 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 MAXP61244 160 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 FAM83EQ2M2I3 478 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms