RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 ARID3BQ8IVW6 561 aaPredicted RBP20.24■□□□□ 0.83
PNKP-214ENST00000600573 UNC5BQ8IZJ1 945 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 TTC16Q8NEE8 873 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 TCP10LQ8TDR4 215 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 IRF7Q92985 503 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 SLC2A11Q9BYW1 496 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 IQCGQ9H095 443 aaKnown RBP20.24■□□□□ 0.83
PNKP-214ENST00000600573 CERS4Q9HA82 394 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 FGFR1OP2Q9NVK5 253 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 MARK1Q9P0L2 795 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 VPS51Q9UID3 782 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 RIMKLBQ9ULI2 386 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 CCL26Q9Y258 94 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 MUSKO15146 869 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 KIAA0754O94854 1291 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 NDST3O95803 873 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 GLDCP23378 1020 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 CSNK1DP48730 415 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 NTHL1P78549 312 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 ANKS4BQ8N8V4 417 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 LRRC8CQ8TDW0 803 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 MFSD3Q96ES6 412 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 SMG9Q9H0W8 520 aaKnown RBP20.24■□□□□ 0.83
PNKP-214ENST00000600573 ABCB8Q9NUT2 735 aa20.24■□□□□ 0.83
PNKP-214ENST00000600573 TMCC1O94876 653 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 CD160O95971 181 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 HADHAP40939 763 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 SCNN1BP51168 640 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 CSE1LP55060 971 aaKnown RBP20.23■□□□□ 0.83
PNKP-214ENST00000600573 SULT2A1Q06520 285 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 ITIH4Q14624 930 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 POU6F1Q14863 301 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 ZKSCAN8Q15776 578 aaPredicted RBP20.23■□□□□ 0.83
PNKP-214ENST00000600573 UGP2Q16851 508 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 PLEKHG6Q3KR16 790 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 KIAA0930Q6ICG6 404 aaPredicted RBP20.23■□□□□ 0.83
PNKP-214ENST00000600573 CES3Q6UWW8 571 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 KCNMB4Q86W47 210 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 ACMSDQ8TDX5 336 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 CABS1Q96KC9 395 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 NOD2Q9HC29 1040 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 SPHK2Q9NRA0 654 aa20.23■□□□□ 0.83
PNKP-214ENST00000600573 C20orf96Q9NUD7 363 aaPredicted RBP20.23■□□□□ 0.83
PNKP-214ENST00000600573 SCAMP3O14828 347 aaKnown RBP20.22■□□□□ 0.83
PNKP-214ENST00000600573 RFPL1O75677 317 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 ATXN1LP0C7T5 689 aaKnown RBP20.22■□□□□ 0.83
PNKP-214ENST00000600573 ERVK-10P10266 1014 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 CEBPBP17676 345 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 NMBRP28336 390 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 SPRP35270 261 aaPredicted RBP20.22■□□□□ 0.83
PNKP-214ENST00000600573 AP1S1P61966 158 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 LMAN2Q12907 356 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 MSLNQ13421 630 aaPredicted RBP20.22■□□□□ 0.83
PNKP-214ENST00000600573 SIRPB2Q5JXA9 342 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 TEDDM1Q5T9Z0 273 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 MROH9Q5TGP6 573 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 LMNTD2Q8IXW0 634 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 SLC25A41Q8N5S1 370 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 VN1R2Q8NFZ6 395 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 GRAMD1AQ96CP6 724 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 LMLNQ96KR4 655 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 ELAC2Q9BQ52 826 aaKnown RBP20.22■□□□□ 0.83
PNKP-214ENST00000600573 ADGRE3Q9BY15 652 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 TREX1Q9NSU2 369 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 OBP2AQ9NY56 170 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 GDE1Q9NZC3 331 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 SLC17A7Q9P2U7 560 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 GRID1Q9ULK0 1009 aa20.22■□□□□ 0.83
PNKP-214ENST00000600573 SNAP91O60641 907 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 SIN3BO75182 1162 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 POLD2P49005 469 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 RHOAP61586 193 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 NCEH1Q6PIU2 408 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 CNTN4Q8IWV2 1026 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 ADGRG2Q8IZP9 1017 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 CALML6Q8TD86 181 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 BRSK1Q8TDC3 778 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 GDPD5Q8WTR4 605 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 SRPK1Q96SB4 655 aaKnown RBP20.21■□□□□ 0.83
PNKP-214ENST00000600573 VPS11Q9H270 941 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 SLC17A6Q9P2U8 582 aa20.21■□□□□ 0.83
PNKP-214ENST00000600573 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.2■□□□□ 0.82
PNKP-214ENST00000600573 HMX2A2RU54 273 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 MROH6A6NGR9 719 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 TIMM44O43615 452 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 SNX3O60493 162 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 PRAMEF12O95522 483 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 DHRS4L1P0CG22 281 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 TSTD2Q5T7W7 516 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 C6orf89Q6UWU4 347 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 TMC5Q6UXY8 1006 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 KDELC2Q7Z4H8 507 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 YTHDF3Q7Z739 585 aaKnown RBP20.2■□□□□ 0.82
PNKP-214ENST00000600573 GPR149Q86SP6 731 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 TMEM25Q86YD3 366 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 WFDC5Q8TCV5 224 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 ISG20Q96AZ6 181 aaKnown RBP20.2■□□□□ 0.82
PNKP-214ENST00000600573 ZSWIM3Q96MP5 696 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 TRIB3Q96RU7 358 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 FAM167BQ9BTA0 163 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms