RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 TRIB3Q96RU7 358 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 RBM15Q96T37 977 aaKnown RBP eCLIP12.78□□□□□ -0.364e-6■□□□□ 8.6
CHMP2A-206ENST00000600118 CARD6Q9BX69 1037 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 TDRD1Q9BXT4 1180 aaKnown RBP12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 SUV39H2Q9H5I1 410 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 ATP13A3Q9H7F0 1226 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 DKK3Q9UBP4 350 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 FAM153AQ9UHL3 310 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 RAI2Q9Y5P3 530 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 MYO18AQ92614 2054 aaKnown RBP12.77□□□□□ -0.36
CHMP2A-206ENST00000600118 FAM86C2PA6NEL3 165 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 FAM187AA6NFU0 413 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 PRR33A8MZF0 331 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 C1QTNF3-AMACRE9PGA6 284 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 F5H423 210 aaPredicted RBP12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 TTI1O43156 1089 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 RAD51CO43502 376 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 RNASEH1O60930 286 aaKnown RBP12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 ANXA9O76027 345 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 PGLSO95336 258 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 ADH1BP00325 375 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 PRLP01236 227 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 IL1BP01584 269 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 EPOP01588 193 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 UGT2B4P06133 528 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 C5AR1P21730 350 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 IVDP26440 423 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 SERPINA4P29622 427 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 AVPR2P30518 371 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 SLC8A1P32418 973 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 ADRA1AP35348 466 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 ACTN2P35609 894 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 FDFT1P37268 417 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 PSMD8P48556 350 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 WNT3AP56704 352 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 MPP3Q13368 585 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 PRPSAP1Q14558 356 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 TRIP13Q15645 432 aaPredicted RBP12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 FAM46CQ5VWP2 391 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 MAATS1Q7Z4T9 603 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 ZSWIM9Q86XI8 627 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 MAML2Q8IZL2 1156 aaPredicted RBP12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 AADATQ8N5Z0 425 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 NOA1Q8NC60 698 aaKnown RBP12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 MDGA1Q8NFP4 955 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 CCHCR1Q8TD31 782 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 ARRDC3Q96B67 414 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 SIPA1Q96FS4 1042 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 MRGPRX2Q96LB1 330 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 KLHL32Q96NJ5 620 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 SLC6A17Q9H1V8 727 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 PABPC3Q9H361 631 aaKnown RBP12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 ETNK1Q9HBU6 452 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 RAB6BQ9NRW1 208 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 SPATA6Q9NWH7 488 aaPredicted RBP12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 UBP1Q9NZI7 540 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 EBF1Q9UH73 591 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 AAR2Q9Y312 384 aaKnown RBP12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 PCDHGC4Q9Y5F7 938 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 ZDBF2Q9HCK1 2354 aa12.77□□□□□ -0.37
CHMP2A-206ENST00000600118 SHROOM3Q8TF72 1996 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 LOC285095A0A1B0GVY8 99 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 KPNA3O00505 521 aaPredicted RBP12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 MID1O15344 667 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 PMPCBO75439 489 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 ALDH1A2O94788 518 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 ITGB7P26010 798 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 DRD3P35462 400 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 MAGEA6P43360 314 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 GEMP55040 296 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 MRPS25P82663 173 aaKnown RBP12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 GPS1Q13098 491 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 PPP1R7Q15435 360 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 FAXCQ5TGI0 409 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 ANO7Q6IWH7 933 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 BRAT1Q6PJG6 821 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 RANBP10Q6VN20 620 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 C1orf210Q8IVY1 113 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 TAB3Q8N5C8 712 aaPredicted RBP12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 LRRN4CLQ8ND94 238 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 HMGB4Q8WW32 186 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 PIH1D2Q8WWB5 315 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 PRCCQ92733 491 aaPredicted RBP12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 TRIM51Q9BSJ1 452 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 HDAC8Q9BY41 377 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 USP36Q9P275 1121 aaKnown RBP12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 SCML1Q9UN30 329 aa12.76□□□□□ -0.37
CHMP2A-206ENST00000600118 A0A1W2PQ67 120 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 C16orf96A6NNT2 1141 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 ERI2A8K979 691 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 BHMG1C9JSJ3 638 aaPredicted RBP12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 SUN1O94901 812 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 AP2A1O95782 977 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 IGLV3-19P01714 112 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 DNTTP04053 509 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 PDHA1P08559 390 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 ATXN1LP0C7T5 689 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 TIMP2P16035 220 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 CA4P22748 312 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms