RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 TXLNGYQ9BZA5 131 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 IL22Q9GZX6 179 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 CDC42EP4Q9H3Q1 356 aaKnown RBP15.61■□□□□ 0.09
UPF1-206ENST00000598471 SLC2A4RGQ9NR83 387 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 EVLQ9UI08 416 aaPredicted RBP15.61■□□□□ 0.09
UPF1-206ENST00000598471 RAI2Q9Y5P3 530 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 MYO18AQ92614 2054 aaKnown RBP15.61■□□□□ 0.09
UPF1-206ENST00000598471 TICRRQ7Z2Z1 1910 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 EDDM13A0A1B0GTR0 161 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 LOC285095A0A1B0GVY8 99 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 C19orf67A6NJJ6 358 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 TTC34A8MYJ7 566 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 AVILO75366 819 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 ZNF821O75541 412 aaPredicted RBP15.6■□□□□ 0.09
UPF1-206ENST00000598471 GJB3O75712 270 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 TSHRP16473 764 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 DRD1P21728 446 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 MGAT1P26572 445 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 ELK3P41970 407 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 CCNHP51946 323 aaPredicted RBP15.6■□□□□ 0.09
UPF1-206ENST00000598471 ZP2Q05996 745 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 MESP2Q0VG99 397 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 GRSF1Q12849 480 aaKnown RBP eCLIP15.6■□□□□ 0.09
UPF1-206ENST00000598471 ZNF234Q14588 700 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 SLC1A5Q15758 541 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 MSS51Q4VC12 460 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 CFAP58Q5T655 872 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 NAIF1Q69YI7 327 aaPredicted RBP15.6■□□□□ 0.09
UPF1-206ENST00000598471 CASC4Q6P4E1 433 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 SERPINA13PQ6UXR4 307 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 KDELC2Q7Z4H8 507 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 ANKMY2Q8IV38 441 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 PALM2Q8IXS6 379 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 SLC25A41Q8N5S1 370 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 FBXO36Q8NEA4 188 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 FRS2Q8WU20 508 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 COL25A1Q9BXS0 654 aaPredicted RBP15.6■□□□□ 0.09
UPF1-206ENST00000598471 CPEB1Q9BZB8 566 aaKnown RBP15.6■□□□□ 0.09
UPF1-206ENST00000598471 PABPC3Q9H361 631 aaKnown RBP15.6■□□□□ 0.09
UPF1-206ENST00000598471 ARNT2Q9HBZ2 717 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 HEBP1Q9NRV9 189 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 THAP10Q9P2Z0 257 aaPredicted RBP15.6■□□□□ 0.09
UPF1-206ENST00000598471 CHMP2BQ9UQN3 213 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 STARD13Q9Y3M8 1113 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 MAD1L1Q9Y6D9 718 aa15.6■□□□□ 0.09
UPF1-206ENST00000598471 A0A1W2PQ67 120 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 MAGEB16A2A368 324 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 WASH3PC4AMC7 463 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 SPAG6O75602 509 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 ALADP13716 330 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 PHBP35232 272 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 HSD17B3P37058 310 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 EPHB1P54762 984 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 RPL26P61254 145 aaKnown RBP15.59■□□□□ 0.09
UPF1-206ENST00000598471 TRAF2Q12933 501 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 MTM1Q13496 603 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 OLIG2Q13516 323 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 LAMB3Q13751 1172 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 CASP8Q14790 479 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 HNRNPA1L2Q32P51 320 aaKnown RBP15.59■□□□□ 0.09
UPF1-206ENST00000598471 SIRPB2Q5JXA9 342 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 ARMC12Q5T9G4 340 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 DENND2CQ68D51 928 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 DPY19L3Q6ZPD9 716 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 PPHLN1Q8NEY8 458 aaKnown RBP15.59■□□□□ 0.09
UPF1-206ENST00000598471 OR6K2Q8NGY2 324 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 PDCD6IPQ8WUM4 868 aaKnown RBP15.59■□□□□ 0.09
UPF1-206ENST00000598471 RMDN1Q96DB5 314 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 STAMBPL1Q96FJ0 436 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 MYO19Q96H55 970 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 LRIG1Q96JA1 1093 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 SIGLEC10Q96LC7 697 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 C9orf72Q96LT7 481 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 UHRF1Q96T88 793 aaPredicted RBP15.59■□□□□ 0.09
UPF1-206ENST00000598471 EBNA1BP2Q99848 306 aaKnown RBP15.59■□□□□ 0.09
UPF1-206ENST00000598471 HEPHQ9BQS7 1158 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 ACBD3Q9H3P7 528 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 ZDHHC6Q9H6R6 413 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 PIH1D1Q9NWS0 290 aaKnown RBP15.59■□□□□ 0.09
UPF1-206ENST00000598471 NINJ2Q9NZG7 142 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 ZC3H7BQ9UGR2 993 aaKnown RBP15.59■□□□□ 0.09
UPF1-206ENST00000598471 SUN2Q9UH99 717 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 RPL26L1Q9UNX3 145 aaKnown RBP15.59■□□□□ 0.09
UPF1-206ENST00000598471 CHKBQ9Y259 395 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 PCDHGC4Q9Y5F7 938 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 TEX264Q9Y6I9 313 aa15.59■□□□□ 0.09
UPF1-206ENST00000598471 COL4A2P08572 1712 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 MAN2B1O00754 1011 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 RIPK2O43353 540 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 NARSO43776 548 aaKnown RBP15.58■□□□□ 0.08
UPF1-206ENST00000598471 BANF1O75531 89 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 TTC4O95801 387 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 GSTA2P09210 222 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 HNRNPLP14866 589 aaKnown RBP eCLIP15.58■□□□□ 0.08
UPF1-206ENST00000598471 PGAM1P18669 254 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 CHRNA4P43681 627 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 FASTKD3Q14CZ7 662 aaKnown RBP15.58■□□□□ 0.08
UPF1-206ENST00000598471 PON2Q15165 354 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 KYNUQ16719 465 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 HP1BP3Q5SSJ5 553 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms