RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 TTC7BQ86TV6 843 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 CAMK1DQ8IU85 385 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 BBS5Q8N3I7 341 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 PGBD5Q8N414 524 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.01□□□□□ -0.17
UPF1-205ENST00000598209 KLK6Q92876 244 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 FEM1CQ96JP0 617 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 CALR3Q96L12 384 aaKnown RBP14.01□□□□□ -0.17
UPF1-205ENST00000598209 ZNF641Q96N77 438 aaPredicted RBP14.01□□□□□ -0.17
UPF1-205ENST00000598209 DESI2Q9BSY9 194 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 MAK16Q9BXY0 300 aaKnown RBP14.01□□□□□ -0.17
UPF1-205ENST00000598209 SUV39H2Q9H5I1 410 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 ATP13A3Q9H7F0 1226 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 ZFR2Q9UPR6 939 aaKnown RBP14.01□□□□□ -0.17
UPF1-205ENST00000598209 ITM2BQ9Y287 266 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 ANKRD6Q9Y2G4 727 aa14.01□□□□□ -0.17
UPF1-205ENST00000598209 A0A1W2PR77 199 aa14□□□□□ -0.17
UPF1-205ENST00000598209 TSPAN11A1L157 253 aa14□□□□□ -0.17
UPF1-205ENST00000598209 PRAMEF26H0Y7S4 382 aa14□□□□□ -0.17
UPF1-205ENST00000598209 NEMP1O14524 444 aa14□□□□□ -0.17
UPF1-205ENST00000598209 APOL1O14791 398 aa14□□□□□ -0.17
UPF1-205ENST00000598209 VILLO15195 856 aa14□□□□□ -0.17
UPF1-205ENST00000598209 SLC31A1O15431 190 aa14□□□□□ -0.17
UPF1-205ENST00000598209 SPINT1O43278 529 aa14□□□□□ -0.17
UPF1-205ENST00000598209 TSPAN6O43657 245 aa14□□□□□ -0.17
UPF1-205ENST00000598209 OPHN1O60890 802 aa14□□□□□ -0.17
UPF1-205ENST00000598209 GJB3O75712 270 aa14□□□□□ -0.17
UPF1-205ENST00000598209 CER1O95813 267 aa14□□□□□ -0.17
UPF1-205ENST00000598209 WNT1P04628 370 aa14□□□□□ -0.17
UPF1-205ENST00000598209 TIMP2P16035 220 aa14□□□□□ -0.17
UPF1-205ENST00000598209 PRLRP16471 622 aa14□□□□□ -0.17
UPF1-205ENST00000598209 MX2P20592 715 aa14□□□□□ -0.17
UPF1-205ENST00000598209 XPAP23025 273 aaPredicted RBP14□□□□□ -0.17
UPF1-205ENST00000598209 SERPINA4P29622 427 aa14□□□□□ -0.17
UPF1-205ENST00000598209 MMP13P45452 471 aa14□□□□□ -0.17
UPF1-205ENST00000598209 C21orf59P57076 290 aa14□□□□□ -0.17
UPF1-205ENST00000598209 AP1S1P61966 158 aa14□□□□□ -0.17
UPF1-205ENST00000598209 RPS21P63220 83 aaKnown RBP14□□□□□ -0.17
UPF1-205ENST00000598209 KIF19Q2TAC6 998 aa14□□□□□ -0.17
UPF1-205ENST00000598209 TMEM259Q4ZIN3 620 aa14□□□□□ -0.17
UPF1-205ENST00000598209 SLC45A4Q5BKX6 768 aa14□□□□□ -0.17
UPF1-205ENST00000598209 LRRC73Q5JTD7 316 aa14□□□□□ -0.17
UPF1-205ENST00000598209 CFAP58Q5T655 872 aa14□□□□□ -0.17
UPF1-205ENST00000598209 MARC1Q5VT66 337 aa14□□□□□ -0.17
UPF1-205ENST00000598209 SLC9A4Q6AI14 798 aa14□□□□□ -0.17
UPF1-205ENST00000598209 KIAA1161Q6NSJ0 714 aa14□□□□□ -0.17
UPF1-205ENST00000598209 TIGD7Q6NT04 549 aaPredicted RBP14□□□□□ -0.17
UPF1-205ENST00000598209 IL27RAQ6UWB1 636 aa14□□□□□ -0.17
UPF1-205ENST00000598209 MFSD7Q6UXD7 560 aa14□□□□□ -0.17
UPF1-205ENST00000598209 RFX6Q8HWS3 928 aa14□□□□□ -0.17
UPF1-205ENST00000598209 PLD5Q8N7P1 536 aa14□□□□□ -0.17
UPF1-205ENST00000598209 HCAR2Q8TDS4 363 aa14□□□□□ -0.17
UPF1-205ENST00000598209 ZNF830Q96NB3 372 aaPredicted RBP14□□□□□ -0.17
UPF1-205ENST00000598209 TSGA13Q96PP4 275 aa14□□□□□ -0.17
UPF1-205ENST00000598209 MGME1Q9BQP7 344 aa14□□□□□ -0.17
UPF1-205ENST00000598209 GAREM1Q9H706 876 aa14□□□□□ -0.17
UPF1-205ENST00000598209 DNAAF2Q9NVR5 837 aaKnown RBP14□□□□□ -0.17
UPF1-205ENST00000598209 DTLQ9NZJ0 730 aa14□□□□□ -0.17
UPF1-205ENST00000598209 GGT7Q9UJ14 662 aa14□□□□□ -0.17
UPF1-205ENST00000598209 SNX11Q9Y5W9 270 aa14□□□□□ -0.17
UPF1-205ENST00000598209 CABIN1Q9Y6J0 2220 aa14□□□□□ -0.17
UPF1-205ENST00000598209 TTC24A2A3L6 582 aaPredicted RBP13.99□□□□□ -0.17
UPF1-205ENST00000598209 AREL1O15033 823 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 ZFXP17010 805 aaPredicted RBP13.99□□□□□ -0.17
UPF1-205ENST00000598209 CR2P20023 1033 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 CCNCP24863 283 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 CDKN2BP42772 138 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 CTSKP43235 329 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 MARCKSL1P49006 195 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 MAXP61244 160 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 BCL2L1Q07817 233 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 HNRNPDQ14103 355 aaKnown RBP13.99□□□□□ -0.17
UPF1-205ENST00000598209 STAT4Q14765 748 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 HLA-BQ31612 363 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 BRAT1Q6PJG6 821 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 ZSCAN30Q86W11 494 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 KATNAL2Q8IYT4 538 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 TXLNBQ8N3L3 684 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 TEX26Q8N6G2 289 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 LRRN4Q8WUT4 740 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 MAML1Q92585 1016 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 SKA1Q96BD8 255 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 HDAC11Q96DB2 347 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 NSMCE3Q96MG7 304 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 NUDCD1Q96RS6 583 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 MYOCQ99972 504 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 IL21RQ9HBE5 538 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 NT5MQ9NPB1 228 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 FZD3Q9NPG1 666 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 SCUBE2Q9NQ36 999 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 CA5BQ9Y2D0 317 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.99□□□□□ -0.17
UPF1-205ENST00000598209 HEY1Q9Y5J3 304 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 PCNX2A6NKB5 2137 aa13.99□□□□□ -0.17
UPF1-205ENST00000598209 TDRD6O60522 2096 aaKnown RBP13.99□□□□□ -0.17
UPF1-205ENST00000598209 A0A0U1RQJ8 604 aa13.98□□□□□ -0.17
UPF1-205ENST00000598209 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.98□□□□□ -0.17
UPF1-205ENST00000598209 IGLON5A6NGN9 336 aa13.98□□□□□ -0.17
UPF1-205ENST00000598209 UPK3BL1B0FP48 263 aa13.98□□□□□ -0.17
UPF1-205ENST00000598209 UPK3BL2E5RIL1 263 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms