RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 MRGPRX3Q96LB0 322 aa8.49□□□□□ -1.05
FARP1-220ENST00000596613 MRGPRX1Q96LB2 322 aa8.49□□□□□ -1.05
FARP1-220ENST00000596613 CCDC114Q96M63 670 aa8.49□□□□□ -1.05
FARP1-220ENST00000596613 CPXM1Q96SM3 734 aa8.49□□□□□ -1.05
FARP1-220ENST00000596613 OMDQ99983 421 aa8.49□□□□□ -1.05
FARP1-220ENST00000596613 BTBD1Q9H0C5 482 aa8.49□□□□□ -1.05
FARP1-220ENST00000596613 SIK2Q9H0K1 926 aa8.49□□□□□ -1.05
FARP1-220ENST00000596613 TRIT1Q9H3H1 467 aaKnown RBP8.49□□□□□ -1.05
FARP1-220ENST00000596613 ACP6Q9NPH0 428 aa8.49□□□□□ -1.05
FARP1-220ENST00000596613 NLRC4Q9NPP4 1024 aa8.49□□□□□ -1.05
FARP1-220ENST00000596613 MYOFQ9NZM1 2061 aa8.49□□□□□ -1.05
FARP1-220ENST00000596613 FAM186AA6NE01 2351 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 IGHV1OR15-9A0A0B4J2B8 117 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 A0A1B0GVM2 712 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 TARSL2A2RTX5 802 aaKnown RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 TCAF2A6NFQ2 919 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 F8VZ95 297 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 GOLGA6L19H0YKK7 550 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 GOLGA8SH3BPF8 625 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 H3BS24 57 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 CLDN11O75508 207 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 SERPINC1P01008 464 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 FYNP06241 537 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 TNFAIP3P21580 790 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 BCKDHBP21953 392 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 TGM1P22735 817 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 HLA-FP30511 346 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 SDC4P31431 198 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 CTSKP43235 329 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 COPB1P53618 953 aaKnown RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 RPS24P62847 133 aaKnown RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 CDR2Q01850 454 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 APBA1Q02410 837 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 SQSTM1Q13501 440 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 UAP1L1Q3KQV9 507 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 PLEKHG6Q3KR16 790 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 SLC25A52Q3SY17 297 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 FAM133BQ5BKY9 247 aaKnown RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 FAM46CQ5VWP2 391 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 ZNF776Q68DI1 518 aaPredicted RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 IL27RAQ6UWB1 636 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 RBM43Q6ZSC3 357 aaKnown RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 TSPYL5Q86VY4 417 aaPredicted RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 WDTC1Q8N5D0 677 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 DEFB119Q8N690 84 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 ZNF655Q8N720 491 aaPredicted RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.48□□□□□ -1.05
FARP1-220ENST00000596613 CPA5Q8WXQ8 436 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 SORCS1Q8WY21 1168 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 TTC17Q96AE7 1141 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 TOE1Q96GM8 510 aaKnown RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 SLC39A13Q96H72 371 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 ZNF419Q96HQ0 510 aaPredicted RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 SLC2A13Q96QE2 648 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 SELENOOQ9BVL4 669 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 GTPBP2Q9BX10 602 aaKnown RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 ZDHHC5Q9C0B5 715 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 TKTL2Q9H0I9 626 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 PCED1AQ9H1Q7 454 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 SGK2Q9HBY8 427 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 SIX2Q9NPC8 291 aa8.48□□□□□ -1.05
FARP1-220ENST00000596613 LIMA1Q9UHB6 759 aaKnown RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 EVLQ9UI08 416 aaPredicted RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 SF3B6Q9Y3B4 125 aaKnown RBP8.48□□□□□ -1.05
FARP1-220ENST00000596613 RALGAPA1Q6GYQ0 2036 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 EDDM13A0A1B0GTR0 161 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 LRRC10BA6NIK2 292 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 LRRC72A6NJI9 287 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 C4orf47A7E2U8 309 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 LGALS16A8MUM7 142 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 WASH4PA8MWX3 477 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 H0Y8X5 98 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 OPHN1O60890 802 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 KCNH1O95259 989 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 ERBB2P04626 1255 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 CAPNS1P04632 268 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 CALB1P05937 261 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 TPM3P06753 285 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 MMEP08473 750 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 SERPINF2P08697 491 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 HLA-EP13747 358 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 FERP16591 822 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 SLC6A4P31645 630 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 CD70P32970 193 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 CDH5P33151 784 aaPredicted RBP8.47□□□□□ -1.05
FARP1-220ENST00000596613 CSKP41240 450 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 RECQLP46063 649 aaPredicted RBP8.47□□□□□ -1.05
FARP1-220ENST00000596613 GABRB2P47870 512 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 TPMTP51580 245 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 CDH4P55283 916 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 IRX4P78413 519 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 ENPP2Q13822 863 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 HNRNPDQ14103 355 aaKnown RBP8.47□□□□□ -1.05
FARP1-220ENST00000596613 LONRF2Q1L5Z9 754 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 SKOR2Q2VWA4 1001 aaPredicted RBP8.47□□□□□ -1.05
FARP1-220ENST00000596613 SLC45A4Q5BKX6 768 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 PITRM1Q5JRX3 1037 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 NAA35Q5VZE5 725 aa8.47□□□□□ -1.05
FARP1-220ENST00000596613 CAVIN1Q6NZI2 390 aaKnown RBP8.47□□□□□ -1.05
FARP1-220ENST00000596613 SLC23A3Q6PIS1 610 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms