RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ERAP2Q6P179 960 aa17.56■□□□□ 0.4
IRF3-208ENST00000594387 ATPAF2Q8N5M1 289 aa17.56■□□□□ 0.4
IRF3-208ENST00000594387 CSPG4P5Q96PW8 444 aa17.56■□□□□ 0.4
IRF3-208ENST00000594387 CHP1Q99653 195 aa17.56■□□□□ 0.4
IRF3-208ENST00000594387 SUV39H2Q9H5I1 410 aa17.56■□□□□ 0.4
IRF3-208ENST00000594387 PCDH18Q9HCL0 1135 aa17.56■□□□□ 0.4
IRF3-208ENST00000594387 ZFR2Q9UPR6 939 aaKnown RBP17.56■□□□□ 0.4
IRF3-208ENST00000594387 DCHS1Q96JQ0 3298 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 IGLON5A6NGN9 336 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 TMEM110-MUSTN1A8MSY1 372 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 TM7SF2O76062 418 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 TCF4P15884 667 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 NFKBIAP25963 317 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 HSPA9P38646 679 aaKnown RBP17.55■□□□□ 0.4
IRF3-208ENST00000594387 ARHGAP25P42331 645 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 SCNN1BP51168 640 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 BCL2L1Q07817 233 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 MESDQ14696 234 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 LBRQ14739 615 aaKnown RBP17.55■□□□□ 0.4
IRF3-208ENST00000594387 ASTE1Q2TB18 679 aaPredicted RBP17.55■□□□□ 0.4
IRF3-208ENST00000594387 TMEM259Q4ZIN3 620 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 BRAT1Q6PJG6 821 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 GLRX5Q86SX6 157 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 LRRC49Q8IUZ0 686 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 ARHGAP12Q8IWW6 846 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 NPWQ8N729 165 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 TMEM145Q8NBT3 493 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 SLC35G2Q8TBE7 412 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 ASB12Q8WXK4 309 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 PACSIN1Q9BY11 444 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 FZD3Q9NPG1 666 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 LUC7LQ9NQ29 371 aaKnown RBP17.55■□□□□ 0.4
IRF3-208ENST00000594387 SPTLC3Q9NUV7 552 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 FTSJ1Q9UET6 329 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 NENFQ9UMX5 172 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 CA5BQ9Y2D0 317 aa17.55■□□□□ 0.4
IRF3-208ENST00000594387 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.54■□□□□ 0.4
IRF3-208ENST00000594387 INSIG1O15503 277 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 TNFSF14O43557 240 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 CBFA2T3O75081 653 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 NEBLO76041 1014 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 PIGNO95427 931 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 FTH1P19P0C7X4 201 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 ABL2P42684 1182 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 RXRGP48443 463 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 FAM193AP78312 1265 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 TXNRD3NBQ6F5E7 133 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 PTAR1Q7Z6K3 402 aaPredicted RBP17.54■□□□□ 0.4
IRF3-208ENST00000594387 GATAD2AQ86YP4 633 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 TSEN2Q8NCE0 465 aaKnown RBP17.54■□□□□ 0.4
IRF3-208ENST00000594387 LENG8Q96PV6 779 aaPredicted RBP17.54■□□□□ 0.4
IRF3-208ENST00000594387 C1QTNF2Q9BXJ5 285 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 INTUQ9ULD6 942 aa17.54■□□□□ 0.4
IRF3-208ENST00000594387 COL5A1P20908 1838 aaPredicted RBP17.54■□□□□ 0.4
IRF3-208ENST00000594387 GOLGA8CPA6NN73 597 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 TIMP2P16035 220 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 EPHA8P29322 1005 aaPredicted RBP17.53■□□□□ 0.4
IRF3-208ENST00000594387 MAN1A1P33908 653 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 RABIFP47224 123 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 CLDN2P57739 230 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 AP1S1P61966 158 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 SPA17Q15506 151 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 UGP2Q16851 508 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 MARC1Q5VT66 337 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 ARHGAP36Q6ZRI8 547 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 Q6ZSR6 202 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 SPATS2Q86XZ4 545 aaKnown RBP17.53■□□□□ 0.4
IRF3-208ENST00000594387 CAMK1DQ8IU85 385 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 DENND6BQ8NEG7 585 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 SAP25Q8TEE9 199 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 SCNM1Q9BWG6 230 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 MAK16Q9BXY0 300 aaKnown RBP17.53■□□□□ 0.4
IRF3-208ENST00000594387 BTBD3Q9Y2F9 522 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 PTPRBP23467 1997 aa17.53■□□□□ 0.4
IRF3-208ENST00000594387 A0A1W2PQ67 120 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 H3BM21 787 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 AREL1O15033 823 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 MMP20O60882 483 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 LDOC1O95751 146 aaPredicted RBP17.52■□□□□ 0.4
IRF3-208ENST00000594387 THOP1P52888 689 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 SLC10A7Q0GE19 358 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 TBX2Q13207 712 aaPredicted RBP17.52■□□□□ 0.4
IRF3-208ENST00000594387 PTK2BQ14289 1009 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 TMEM52BQ4KMG9 183 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 ANKRD20A8PQ5CZ79 823 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 LRRC73Q5JTD7 316 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 TIGD7Q6NT04 549 aaPredicted RBP17.52■□□□□ 0.4
IRF3-208ENST00000594387 KYAT3Q6YP21 454 aaKnown RBP17.52■□□□□ 0.4
IRF3-208ENST00000594387 ABI3BPQ7Z7G0 1075 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 EID2Q8N6I1 236 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 OR13H1Q8NG92 308 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 TSC1Q92574 1164 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 IFT43Q96FT9 208 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 ZNF830Q96NB3 372 aaPredicted RBP17.52■□□□□ 0.4
IRF3-208ENST00000594387 CNTNAP3BQ96NU0 1288 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 PSKH2Q96QS6 385 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 ZNF670Q9BS34 389 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 WRAP53Q9BUR4 548 aaKnown RBP17.52■□□□□ 0.4
IRF3-208ENST00000594387 CNTNAP3Q9BZ76 1288 aa17.52■□□□□ 0.4
IRF3-208ENST00000594387 SCUBE2Q9NQ36 999 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms