RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ZNF408Q9H9D4 720 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 MIOSQ9NXC5 875 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 RRN3Q9NYV6 651 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 H3BSA7 217 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 CACNG3O60359 315 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 SLC5A2P31639 672 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 HERC3Q15034 1050 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 CNSTQ6PJW8 725 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 CNTN4Q8IWV2 1026 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 TMEM102Q8N9M5 508 aaPredicted RBP16.66■□□□□ 0.26
LIG1-206ENST00000594067 DQX1Q8TE96 717 aaKnown RBP16.66■□□□□ 0.26
LIG1-206ENST00000594067 LPPQ93052 612 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 MYLPFQ96A32 169 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 SMARCD1Q96GM5 515 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 KLHL32Q96NJ5 620 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 TSGA13Q96PP4 275 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 MRPL1Q9BYD6 325 aaKnown RBP16.66■□□□□ 0.26
LIG1-206ENST00000594067 MRPL46Q9H2W6 279 aaKnown RBP16.66■□□□□ 0.26
LIG1-206ENST00000594067 GLOD4Q9HC38 313 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 BCAP29Q9UHQ4 241 aa16.66■□□□□ 0.26
LIG1-206ENST00000594067 UNCXA6NJT0 531 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 SDHDO14521 159 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 ACOT8O14734 319 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 AURKAO14965 403 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 BCAS2O75934 225 aaPredicted RBP16.65■□□□□ 0.26
LIG1-206ENST00000594067 CHRNA4P43681 627 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 NR1H2P55055 460 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 BEX3Q00994 111 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 SEPT6Q14141 434 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 ZNF470Q6ECI4 717 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 KLC3Q6P597 504 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 RPS27LQ71UM5 84 aaKnown RBP16.65■□□□□ 0.26
LIG1-206ENST00000594067 TLK2Q86UE8 772 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 RNF135Q8IUD6 432 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 ARHGAP12Q8IWW6 846 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 IRGQQ8WZA9 623 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 PAAF1Q9BRP4 392 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 CYP4F12Q9HCS2 524 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 CHST12Q9NRB3 414 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 DICER1Q9UPY3 1922 aaKnown RBP16.65■□□□□ 0.26
LIG1-206ENST00000594067 ARHGAP10A1A4S6 786 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 CASTOR2A6NHX0 329 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 KCNU1A8MYU2 1149 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 TADA2AO75478 443 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 BDNFP23560 247 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 DNAJB2P25686 324 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 ADSLP30566 484 aaPredicted RBP16.65■□□□□ 0.26
LIG1-206ENST00000594067 TRIM67Q6ZTA4 783 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 PLEKHH3Q7Z736 793 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 PCDH20Q8N6Y1 951 aaKnown RBP16.65■□□□□ 0.26
LIG1-206ENST00000594067 PNPLA1Q8N8W4 532 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 PDCD6IPQ8WUM4 868 aaKnown RBP16.65■□□□□ 0.26
LIG1-206ENST00000594067 DLG3Q92796 817 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 MS4A4AQ96JQ5 239 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 FCRL5Q96RD9 977 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 TRPV6Q9H1D0 765 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 OSBPL2Q9H1P3 480 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 DNAAF2Q9NVR5 837 aaKnown RBP16.65■□□□□ 0.26
LIG1-206ENST00000594067 ADA2Q9NZK5 511 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 TCAF1Q9Y4C2 921 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 PTCH2Q9Y6C5 1203 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 AK5Q9Y6K8 562 aa16.65■□□□□ 0.26
LIG1-206ENST00000594067 A0A1B0GTW7 788 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 RNASEH2AO75792 299 aaKnown RBP16.64■□□□□ 0.26
LIG1-206ENST00000594067 FAM163BP0C2L3 166 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 CCNCP24863 283 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 CD151P48509 253 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 HSPA13P48723 471 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 CSHL1Q14406 222 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 NOMO2Q5JPE7 1267 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 FAM219BQ5XKK7 198 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 FAM43BQ6ZT52 329 aaPredicted RBP16.64■□□□□ 0.26
LIG1-206ENST00000594067 AMIGO2Q86SJ2 522 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 TMEM86AQ8N2M4 240 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 BRI3BPQ8WY22 251 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 SLC39A8Q9C0K1 460 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 NDFIP2Q9NV92 336 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 CIDEBQ9UHD4 219 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 CDH9Q9ULB4 789 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 PADI4Q9UM07 663 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 NEU3Q9UQ49 428 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 CEPT1Q9Y6K0 416 aa16.64■□□□□ 0.26
LIG1-206ENST00000594067 TRIP12Q14669 1992 aaPredicted RBP16.64■□□□□ 0.25
LIG1-206ENST00000594067 NPHS1O60500 1241 aa16.64■□□□□ 0.25
LIG1-206ENST00000594067 ANXA9O76027 345 aa16.64■□□□□ 0.25
LIG1-206ENST00000594067 ZNF26P17031 533 aaPredicted RBP16.64■□□□□ 0.25
LIG1-206ENST00000594067 CDH2P19022 906 aaPredicted RBP16.64■□□□□ 0.25
LIG1-206ENST00000594067 ZNF135P52742 658 aaPredicted RBP16.64■□□□□ 0.25
LIG1-206ENST00000594067 PTK2BQ14289 1009 aa16.64■□□□□ 0.25
LIG1-206ENST00000594067 PAN2Q504Q3 1202 aaKnown RBP16.64■□□□□ 0.25
LIG1-206ENST00000594067 RBM20Q5T481 1227 aaKnown RBP16.64■□□□□ 0.25
LIG1-206ENST00000594067 KLHDC8BQ8IXV7 354 aa16.64■□□□□ 0.25
LIG1-206ENST00000594067 GAB3Q8WWW8 586 aa16.64■□□□□ 0.25
LIG1-206ENST00000594067 TIMMDC1Q9NPL8 285 aa16.64■□□□□ 0.25
LIG1-206ENST00000594067 NCKIPSDQ9NZQ3 722 aa16.64■□□□□ 0.25
LIG1-206ENST00000594067 GMEB1Q9Y692 573 aa16.64■□□□□ 0.25
LIG1-206ENST00000594067 A0A0J9YVX5 310 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 TRPA1O75762 1119 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 HLA-DQB2P05538 268 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 EMP3P54852 163 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms