RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 CLDN2P57739 230 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 E4F1Q66K89 784 aaPredicted RBP16.71■□□□□ 0.27
SYMPK-204ENST00000593959 SCYL2Q6P3W7 929 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 DCUN1D2Q6PH85 259 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 PDCD7Q8N8D1 485 aaKnown RBP16.71■□□□□ 0.27
SYMPK-204ENST00000593959 HCAR2Q8TDS4 363 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 RFFLQ8WZ73 363 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 HMCESQ96FZ2 354 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 CPEB1Q9BZB8 566 aaKnown RBP16.71■□□□□ 0.27
SYMPK-204ENST00000593959 LRRC19Q9H756 370 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 CATSPERBQ9H7T0 1116 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 PDFQ9HBH1 243 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 FZD3Q9NPG1 666 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 DKK3Q9UBP4 350 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 IGSF10Q6WRI0 2623 aa16.71■□□□□ 0.27
SYMPK-204ENST00000593959 SPTY2D1-AS1A0A0U1RR47 76 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 POM121BA6NF01 834 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 KRIT1O00522 736 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 BUB1O43683 1085 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 HNRNPH3P31942 346 aaKnown RBP16.7■□□□□ 0.26
SYMPK-204ENST00000593959 NDST2P52849 883 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 ATXN7L2Q5T6C5 722 aaPredicted RBP16.7■□□□□ 0.26
SYMPK-204ENST00000593959 GDPD4Q6W3E5 623 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 LEKR1Q6ZMV7 388 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 Q6ZSR6 202 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 CYP4V2Q6ZWL3 525 aaPredicted RBP16.7■□□□□ 0.26
SYMPK-204ENST00000593959 ZNF571Q7Z3V5 609 aaPredicted RBP16.7■□□□□ 0.26
SYMPK-204ENST00000593959 MARCH9Q86YJ5 346 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 CCDC170Q8IYT3 715 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 TXLNBQ8N3L3 684 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 DENND6BQ8NEG7 585 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 OR6K2Q8NGY2 324 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 OR4C6Q8NH72 309 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 MDM1Q8TC05 714 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 ARHGEF26Q96DR7 871 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 GDAP1L1Q96MZ0 367 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 HAUS4Q9H6D7 363 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 UCKL1Q9NWZ5 548 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 DONSONQ9NYP3 566 aa16.7■□□□□ 0.26
SYMPK-204ENST00000593959 FAM149AA5PLN7 773 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 IGLON5A6NGN9 336 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 DDX3XO00571 662 aaKnown RBP eCLIP16.69■□□□□ 0.26
SYMPK-204ENST00000593959 SIGLEC6O43699 453 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 CREB3O43889 395 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 SDC3O75056 442 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 PIAS2O75928 621 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 UGT2B4P06133 528 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 CYLC1P35663 651 aaPredicted RBP16.69■□□□□ 0.26
SYMPK-204ENST00000593959 SUOXP51687 545 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 PFN3P60673 137 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 FZD2Q14332 565 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 CYTH1Q15438 398 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 AFMIDQ63HM1 303 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 PSTKQ8IV42 348 aaKnown RBP16.69■□□□□ 0.26
SYMPK-204ENST00000593959 CENPTQ96BT3 561 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 KLHL32Q96NJ5 620 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 MYOCQ99972 504 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 LHX3Q9UBR4 397 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 GGT7Q9UJ14 662 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 GPSM3Q9Y4H4 160 aa16.69■□□□□ 0.26
SYMPK-204ENST00000593959 BZW2Q9Y6E2 419 aaKnown RBP16.69■□□□□ 0.26
SYMPK-204ENST00000593959 TSPAN11A1L157 253 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 FTLP02792 175 aaPredicted RBP16.68■□□□□ 0.26
SYMPK-204ENST00000593959 CSF2P04141 144 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 CCDC175P0C221 793 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 NME1P15531 152 aaKnown RBP16.68■□□□□ 0.26
SYMPK-204ENST00000593959 RABIFP47224 123 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 HCAR3P49019 387 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
SYMPK-204ENST00000593959 ASIC2Q16515 512 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 CA9Q16790 459 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 DNTTIP2Q5QJE6 756 aaKnown RBP16.68■□□□□ 0.26
SYMPK-204ENST00000593959 ERMARDQ5T6L9 678 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 TMEM139Q8IV31 216 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 RYBPQ8N488 228 aaPredicted RBP16.68■□□□□ 0.26
SYMPK-204ENST00000593959 FAM181AQ8N9Y4 354 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 PEBP4Q96S96 227 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 CALN1Q9BXU9 219 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 ISCUQ9H1K1 167 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 AP4E1Q9UPM8 1137 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 CACNA1GO43497 2377 aa16.68■□□□□ 0.26
SYMPK-204ENST00000593959 URB1O60287 2271 aaKnown RBP16.68■□□□□ 0.26
SYMPK-204ENST00000593959 SCAMP1O15126 338 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 PRAMEF11O60813 436 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 IGSF6O95976 241 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 CKMT1AP12532 417 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 TIMP2P16035 220 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 DESP17661 470 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 PSMA2P25787 234 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 TPI1P60174 286 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 RHOAP61586 193 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 HNRNPKP61978 463 aaKnown RBP eCLIP16.67■□□□□ 0.26
SYMPK-204ENST00000593959 RAD51Q06609 339 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 SGCGQ13326 291 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 HGSNATQ68CP4 663 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 TRIM7Q9C029 511 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 CAAP1Q9H8G2 361 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 LUC7LQ9NQ29 371 aaKnown RBP16.67■□□□□ 0.26
SYMPK-204ENST00000593959 NLGN3Q9NZ94 848 aa16.67■□□□□ 0.26
SYMPK-204ENST00000593959 ITM2BQ9Y287 266 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms